RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 SLC25A11Q02978 314 aaKnown RBP16.88■□□□□ 0.29
TMEM53-203ENST00000372242 SCAPQ12770 1279 aa16.88■□□□□ 0.29
TMEM53-203ENST00000372242 CA9Q16790 459 aa16.88■□□□□ 0.29
TMEM53-203ENST00000372242 EFHC2Q5JST6 749 aa16.88■□□□□ 0.29
TMEM53-203ENST00000372242 ERMARDQ5T6L9 678 aa16.88■□□□□ 0.29
TMEM53-203ENST00000372242 FYB2Q5VWT5 728 aa16.88■□□□□ 0.29
TMEM53-203ENST00000372242 C12orf40Q86WS4 652 aa16.88■□□□□ 0.29
TMEM53-203ENST00000372242 IGSF8Q969P0 613 aa16.88■□□□□ 0.29
TMEM53-203ENST00000372242 C1orf74Q96LT6 269 aa16.88■□□□□ 0.29
TMEM53-203ENST00000372242 STIM2Q9P246 746 aa16.88■□□□□ 0.29
TMEM53-203ENST00000372242 LCMT1Q9UIC8 334 aa16.88■□□□□ 0.29
TMEM53-203ENST00000372242 AP4E1Q9UPM8 1137 aa16.88■□□□□ 0.29
TMEM53-203ENST00000372242 SPECC1L-ADORA2AF8WAN1 911 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 TBL1XO60907 577 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 CYBBP04839 570 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 CD72P21854 359 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 COMTP21964 271 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 MAN1A1P33908 653 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 GAD2Q05329 585 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 MTA1Q13330 715 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 ATP13A4Q4VNC1 1196 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 MPPE1Q53F39 396 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 DAAM2Q86T65 1068 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 CIR1Q86X95 450 aaPredicted RBP16.87■□□□□ 0.29
TMEM53-203ENST00000372242 HSPH1Q92598 858 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 RPRD1AQ96P16 312 aaPredicted RBP16.87■□□□□ 0.29
TMEM53-203ENST00000372242 NCAPGQ9BPX3 1015 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 WNT16Q9UBV4 365 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 CLEC4EQ9ULY5 219 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 PYCARDQ9ULZ3 195 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 ALG6Q9Y672 507 aa16.87■□□□□ 0.29
TMEM53-203ENST00000372242 KRBA1A5PL33 1030 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 DCXO43602 365 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 KRT86O43790 486 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 PENKP01210 267 aaPredicted RBP16.86■□□□□ 0.29
TMEM53-203ENST00000372242 RARAP10276 462 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 TNNT1P13805 278 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 HOXD9P28356 352 aaPredicted RBP16.86■□□□□ 0.29
TMEM53-203ENST00000372242 CTHP32929 405 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 ARTNQ5T4W7 220 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 TXNDC11Q6PKC3 985 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 TPRG1Q6ZUI0 275 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 ZNF683Q8IZ20 524 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 SIX5Q8N196 739 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 TSGA10Q9BZW7 698 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 OSBPL2Q9H1P3 480 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 DHX35Q9H5Z1 703 aaKnown RBP16.86■□□□□ 0.29
TMEM53-203ENST00000372242 ARHGEF3Q9NR81 526 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 MARK1Q9P0L2 795 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.86■□□□□ 0.29
TMEM53-203ENST00000372242 SHISA7A6NL88 538 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 E9PAM4 449 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 TRIM24O15164 1050 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 HOXC11O43248 304 aaPredicted RBP16.86■□□□□ 0.29
TMEM53-203ENST00000372242 SPOPO43791 374 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 SLC6A11P48066 632 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 AIF1P55008 147 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 MLF2Q15773 248 aaPredicted RBP16.86■□□□□ 0.29
TMEM53-203ENST00000372242 HADHQ16836 314 aaKnown RBP16.86■□□□□ 0.29
TMEM53-203ENST00000372242 HJURPQ8NCD3 748 aaPredicted RBP16.86■□□□□ 0.29
TMEM53-203ENST00000372242 COL25A1Q9BXS0 654 aaPredicted RBP16.86■□□□□ 0.29
TMEM53-203ENST00000372242 MPP6Q9NZW5 540 aa16.86■□□□□ 0.29
TMEM53-203ENST00000372242 GRID2IPA4D2P6 1211 aa16.85■□□□□ 0.29
TMEM53-203ENST00000372242 CREB3O43889 395 aa16.85■□□□□ 0.29
TMEM53-203ENST00000372242 LRIG2O94898 1065 aa16.85■□□□□ 0.29
TMEM53-203ENST00000372242 OPRD1P41143 372 aa16.85■□□□□ 0.29
TMEM53-203ENST00000372242 MESP2Q0VG99 397 aa16.85■□□□□ 0.29
TMEM53-203ENST00000372242 BOLA3Q53S33 107 aa16.85■□□□□ 0.29
TMEM53-203ENST00000372242 ALFQ53S48 1182 aa16.85■□□□□ 0.29
TMEM53-203ENST00000372242 PPP6R3Q5H9R7 873 aaPredicted RBP16.85■□□□□ 0.29
TMEM53-203ENST00000372242 C11orf63Q6NUN7 778 aa16.85■□□□□ 0.29
TMEM53-203ENST00000372242 LRRC31Q6UY01 552 aa16.85■□□□□ 0.29
TMEM53-203ENST00000372242 EDAQ92838 391 aa16.85■□□□□ 0.29
TMEM53-203ENST00000372242 FBRSL1Q9HCM7 1045 aaKnown RBP16.85■□□□□ 0.29
TMEM53-203ENST00000372242 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.85■□□□□ 0.29
TMEM53-203ENST00000372242 KLHL11Q9NVR0 708 aa16.85■□□□□ 0.29
TMEM53-203ENST00000372242 TRMT1Q9NXH9 659 aaKnown RBP16.85■□□□□ 0.29
TMEM53-203ENST00000372242 CAPN6Q9Y6Q1 641 aa16.85■□□□□ 0.29
TMEM53-203ENST00000372242 CACNG3O60359 315 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 TULP3O75386 442 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 PALMO75781 387 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 CNTN5O94779 1100 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 SLC1A1P43005 524 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 RABGAP1LQ5R372 815 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 RWDD4Q6NW29 188 aaKnown RBP16.84■□□□□ 0.29
TMEM53-203ENST00000372242 RALGPS2Q86X27 583 aaPredicted RBP16.84■□□□□ 0.29
TMEM53-203ENST00000372242 ETFBKMTQ8IXQ9 262 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 CARNMT1Q8N4J0 409 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 LRRC57Q8N9N7 239 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 KIAA1524Q8TCG1 905 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 WFDC5Q8TCV5 224 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 KCTD15Q96SI1 283 aaPredicted RBP16.84■□□□□ 0.29
TMEM53-203ENST00000372242 C8orf33Q9H7E9 229 aaPredicted RBP16.84■□□□□ 0.29
TMEM53-203ENST00000372242 DNAJC17Q9NVM6 304 aaKnown RBP16.84■□□□□ 0.29
TMEM53-203ENST00000372242 MIA3Q5JRA6 1907 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 IGLV3-10A0A075B6K4 115 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 TYW5A2RUC4 315 aaKnown RBP16.84■□□□□ 0.29
TMEM53-203ENST00000372242 L1CAMP32004 1257 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 GALK1P51570 392 aa16.84■□□□□ 0.29
TMEM53-203ENST00000372242 KDSRQ06136 332 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms