RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 UXS1Q8NBZ7 420 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 MIEF1Q9NQG6 463 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 LIMD1Q9UGP4 676 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 PTGES3LE9PB15 166 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 GHRP10912 638 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 CCDC153Q494R4 210 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 SLC2A14Q8TDB8 520 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 PAIP1Q9H074 479 aaKnown RBP24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 ITSN1Q15811 1721 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 PHGDHO43175 533 aaKnown RBP24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 SEC22BO75396 215 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 NCKAP1LP55160 1127 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 BOP1Q14137 746 aaKnown RBP24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 TAF2Q6P1X5 1199 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 CYP4Z1Q86W10 505 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 DEFB106AQ8N104 65 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 MRPS31Q92665 395 aaKnown RBP24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 OPTNQ96CV9 577 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 REXO4Q9GZR2 422 aaKnown RBP24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 HDHD2Q9H0R4 259 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 DUSP12Q9UNI6 340 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 SLCO1B7G3V0H7 640 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 MIPP30301 263 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 CYP39A1Q9NYL5 469 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 TRPM5Q9NZQ8 1165 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 NDUFAF1Q9Y375 327 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 SNCAIPQ9Y6H5 919 aa24.45■■□□□ 1.5
RAPGEF1-203ENST00000372195 EIF2B2P49770 351 aaKnown RBP24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 CASP5P51878 434 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 CPNE1Q99829 537 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 TSEN34Q9BSV6 310 aaKnown RBP24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 PARVBQ9HBI1 364 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 THAP1Q9NVV9 213 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 ATG7O95352 703 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 PROCP04070 461 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 TRMT5Q32P41 509 aaKnown RBP24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 FBXO39Q8N4B4 442 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 KRCC1Q9NPI7 259 aaPredicted RBP24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 C15orf59Q2T9L4 293 aaPredicted RBP24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 DMAP1Q9NPF5 467 aaPredicted RBP24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 SMIM22K7EJ46 135 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 TRMT11Q7Z4G4 463 aaKnown RBP24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 SLC41A1Q8IVJ1 513 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 CDHR5Q9HBB8 845 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 SNUPNO95149 360 aaKnown RBP24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 ARMCX4Q5H9R4 360 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 SPANXN3Q5MJ09 141 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 TMC5Q6UXY8 1006 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 PWWP2AQ96N64 755 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 XPNPEP3Q9NQH7 507 aa24.44■■□□□ 1.5
RAPGEF1-203ENST00000372195 E5RJQ4 531 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 NDUFB5O43674 189 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 PSMD7P51665 324 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 CLVS1Q8IUQ0 354 aaPredicted RBP24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 PCDH20Q8N6Y1 951 aaKnown RBP24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 DDX4Q9NQI0 724 aaKnown RBP24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 TBX4P57082 545 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 CDH17Q12864 832 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 GLT6D1Q7Z4J2 308 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 CYP3A43Q9HB55 503 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 BLOC1S4Q9NUP1 217 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 ZNF112Q9UJU3 913 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 TRIM43BA6NCK2 446 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 CNOT3O75175 753 aaKnown RBP24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 CKBP12277 381 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 DPYSL3Q14195 570 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 NCF4Q15080 339 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 FAM98BQ52LJ0 330 aaKnown RBP24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 HERC6Q8IVU3 1022 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 ZFPM1Q8IX07 1006 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 SHOC2Q9UQ13 582 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 WASHC2DQ5SRD0 308 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 KCNT2Q6UVM3 1135 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 RD3Q7Z3Z2 195 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 BHLHE22Q8NFJ8 381 aaPredicted RBP24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 ATXN2LQ8WWM7 1075 aaKnown RBP24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 SYBUQ9NX95 663 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 RSBN1Q5VWQ0 802 aaPredicted RBP24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 RAD54BQ9Y620 910 aa24.43■■□□□ 1.5
RAPGEF1-203ENST00000372195 YBX3P16989 372 aaKnown RBP eCLIP24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 GP5P40197 560 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 NT5DC1Q5TFE4 455 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 SLC35C1Q96A29 364 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 DEPDC7Q96QD5 511 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 TLR8Q9NR97 1041 aaKnown RBP24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 RAB21Q9UL25 225 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 A0A1B0GW55 424 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 H3BRB1 525 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 DUX4L2P0CJ85 424 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 DUX4L3P0CJ86 424 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 DUX4L4P0CJ87 422 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 DUX4L5P0CJ88 424 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 DUX4L6P0CJ89 424 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 DUX4L7P0CJ90 424 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 SKIV2L2P42285 1042 aaKnown RBP24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 METTL7BQ6UX53 244 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 VPS33AQ96AX1 596 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 TUT1Q9H6E5 874 aaKnown RBP24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 DUX4Q9UBX2 424 aa24.42■■□□□ 1.5
RAPGEF1-203ENST00000372195 JCADQ9P266 1359 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms