RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 THAP9Q9H5L6 903 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 POPDC2Q9HBU9 364 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 UBE2TQ9NPD8 197 aaPredicted RBP16.76■□□□□ 0.27
VMA21-202ENST00000370361 ST7Q9NRC1 585 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 TPX2Q9ULW0 747 aaKnown RBP16.76■□□□□ 0.27
VMA21-202ENST00000370361 MAP1BP46821 2468 aaKnown RBP16.75■□□□□ 0.27
VMA21-202ENST00000370361 PCNX2A6NKB5 2137 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 MUC22E2RYF6 1773 aaPredicted RBP16.75■□□□□ 0.27
VMA21-202ENST00000370361 GIPC1O14908 333 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 BCAT2O15382 392 aaPredicted RBP16.75■□□□□ 0.27
VMA21-202ENST00000370361 TBL1XO60907 577 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 GABBR2O75899 941 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 CER1O95813 267 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 PROS1P07225 676 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 GNA15P30679 374 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 OXCT1P55809 520 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 STX17P56962 302 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 CDH18Q13634 790 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 ZNF423Q2M1K9 1284 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 TTC39BQ5VTQ0 682 aaPredicted RBP16.75■□□□□ 0.27
VMA21-202ENST00000370361 TRIM65Q6PJ69 517 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 GBP6Q6ZN66 633 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 SCUBE3Q8IX30 993 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 MLKLQ8NB16 471 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 ZNF606Q8WXB4 792 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 TTC17Q96AE7 1141 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 SLC39A13Q96H72 371 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 BTN2A3PQ96KV6 586 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 NOX5Q96PH1 765 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 MIS12Q9H081 205 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 SGK2Q9HBY8 427 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 OSGEPQ9NPF4 335 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 ASNSD1Q9NWL6 643 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 APEX2Q9UBZ4 518 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 SLC12A6Q9UHW9 1150 aa16.75■□□□□ 0.27
VMA21-202ENST00000370361 KCNJ18B7U540 433 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 RNASEH1O60930 286 aaKnown RBP16.74■□□□□ 0.27
VMA21-202ENST00000370361 DNTTP04053 509 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 SRPRAP08240 638 aaKnown RBP16.74■□□□□ 0.27
VMA21-202ENST00000370361 YWHAZP63104 245 aaKnown RBP16.74■□□□□ 0.27
VMA21-202ENST00000370361 FOXC1Q12948 553 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 GRIK2Q13002 908 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 SLC12A1Q13621 1099 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 PTPRNQ16849 979 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 EXOC3L4Q17RC7 722 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 MS4A13Q5J8X5 152 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 DCAF12L1Q5VU92 463 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 ZNF776Q68DI1 518 aaPredicted RBP16.74■□□□□ 0.27
VMA21-202ENST00000370361 USP30Q70CQ3 517 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 FAM114A1Q8IWE2 563 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 SORCS1Q8WY21 1168 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 FCRL2Q96LA5 508 aaPredicted RBP16.74■□□□□ 0.27
VMA21-202ENST00000370361 PPP1R9BQ96SB3 815 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 ADAM33Q9BZ11 813 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 BTBD1Q9H0C5 482 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 TJP2Q9UDY2 1190 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 WASF3Q9UPY6 502 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 NEUROG3Q9Y4Z2 214 aa16.74■□□□□ 0.27
VMA21-202ENST00000370361 THAP12O43422 761 aa16.73■□□□□ 0.27
VMA21-202ENST00000370361 GJB3O75712 270 aa16.73■□□□□ 0.27
VMA21-202ENST00000370361 LETM1O95202 739 aaPredicted RBP16.73■□□□□ 0.27
VMA21-202ENST00000370361 FYNP06241 537 aa16.73■□□□□ 0.27
VMA21-202ENST00000370361 SLC6A4P31645 630 aa16.73■□□□□ 0.27
VMA21-202ENST00000370361 AFF3P51826 1226 aaKnown RBP16.73■□□□□ 0.27
VMA21-202ENST00000370361 SIM1P81133 766 aaPredicted RBP16.73■□□□□ 0.27
VMA21-202ENST00000370361 TEAD4Q15561 434 aa16.73■□□□□ 0.27
VMA21-202ENST00000370361 RFWD3Q6PCD5 774 aa16.73■□□□□ 0.27
VMA21-202ENST00000370361 UNQ6494/PRO21346Q6UXR6 183 aa16.73■□□□□ 0.27
VMA21-202ENST00000370361 CLEC4CQ8WTT0 213 aa16.73■□□□□ 0.27
VMA21-202ENST00000370361 CYB5D2Q8WUJ1 264 aa16.73■□□□□ 0.27
VMA21-202ENST00000370361 CD93Q9NPY3 652 aa16.73■□□□□ 0.27
VMA21-202ENST00000370361 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.73■□□□□ 0.27
VMA21-202ENST00000370361 KIAA1522Q9P206 1035 aaPredicted RBP16.73■□□□□ 0.27
VMA21-202ENST00000370361 PCDHGC3Q9UN70 934 aa16.73■□□□□ 0.27
VMA21-202ENST00000370361 NCKAP1Q9Y2A7 1128 aa16.73■□□□□ 0.27
VMA21-202ENST00000370361 CEP295Q9C0D2 2601 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 TARSL2A2RTX5 802 aaKnown RBP16.72■□□□□ 0.27
VMA21-202ENST00000370361 PIK3R2O00459 728 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 LUC7L3O95232 432 aaKnown RBP16.72■□□□□ 0.27
VMA21-202ENST00000370361 IGLV3-25P01717 112 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 HLA-EP13747 358 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 CD59P13987 128 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 SGSHP51688 502 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 SULT2A1Q06520 285 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 PDCLQ13371 301 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 HNRNPA1L2Q32P51 320 aaKnown RBP16.72■□□□□ 0.27
VMA21-202ENST00000370361 EFHC1Q5JVL4 640 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 NADSYN1Q6IA69 706 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 CLEC17AQ6ZS10 378 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 TAC4Q86UU9 113 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 ATP6V0D2Q8N8Y2 350 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 SHC3Q92529 594 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 ERLEC1Q96DZ1 483 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 LMLNQ96KR4 655 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 PRICKLE1Q96MT3 831 aaPredicted RBP16.72■□□□□ 0.27
VMA21-202ENST00000370361 MIR1-1HGQ9H1L0 117 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 RSPH9Q9H1X1 276 aaPredicted RBP16.72■□□□□ 0.27
VMA21-202ENST00000370361 PRSS16Q9NQE7 514 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 DACH1Q9UI36 760 aa16.72■□□□□ 0.27
VMA21-202ENST00000370361 NAALADL1Q9UQQ1 740 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms