RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 UBA3Q8TBC4 463 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 USP33Q8TEY7 942 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 ALG3Q92685 438 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 FUBP3Q96I24 572 aaKnown RBP eCLIP10.38□□□□□ -0.75
TPM3-210ENST00000368530 NT5C1AQ9BXI3 368 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 AP1M1Q9BXS5 423 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 ARGLU1Q9NWB6 273 aaPredicted RBP10.38□□□□□ -0.75
TPM3-210ENST00000368530 RNF14Q9UBS8 474 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 TJP2Q9UDY2 1190 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 CYTH4Q9UIA0 394 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 ARHGAP26Q9UNA1 814 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 NME7Q9Y5B8 376 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 SPAG17Q6Q759 2223 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 TRAV19A0A0A6YYK7 116 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 LNP1A1A4G5 178 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 C4orf47A7E2U8 309 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 A8MXQ7 604 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 PGRMC1O00264 195 aaKnown RBP10.38□□□□□ -0.75
TPM3-210ENST00000368530 CDX4O14627 284 aaPredicted RBP10.38□□□□□ -0.75
TPM3-210ENST00000368530 SEC31AO94979 1220 aaKnown RBP10.38□□□□□ -0.75
TPM3-210ENST00000368530 CKMP06732 381 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 PDGFRBP09619 1106 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 HNRNPLP14866 589 aaKnown RBP eCLIP10.38□□□□□ -0.75
TPM3-210ENST00000368530 HDCP19113 662 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 LHX1P48742 406 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 TUBB4BP68371 445 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 MAMLD1Q13495 774 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 GOLGA7BQ2TAP0 167 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 PTPN20Q4JDL3 420 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 PMS2CLQ68D20 193 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 RNF43Q68DV7 783 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 PLEKHA7Q6IQ23 1121 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 DNAJC24Q6P3W2 148 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 ADAT2Q7Z6V5 191 aaKnown RBP10.38□□□□□ -0.75
TPM3-210ENST00000368530 SFTPA1Q8IWL2 248 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 KLHL7Q8IXQ5 586 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 ADGRF2Q8IZF7 708 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 ADGRG2Q8IZP9 1017 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 MMGT1Q8N4V1 131 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 UBL4BQ8N7F7 174 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 ATP2A3Q93084 1043 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 VCPIP1Q96JH7 1222 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 SPATA17Q96L03 361 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 KRT12Q99456 494 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 LRRC1Q9BTT6 524 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 ZNF518BQ9C0D4 1074 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 RNF38Q9H0F5 515 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 DPEP3Q9H4B8 488 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 SYNCQ9H7C4 482 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 TRPC7Q9HCX4 862 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 MRPL47Q9HD33 250 aaKnown RBP10.38□□□□□ -0.75
TPM3-210ENST00000368530 CRTAC1Q9NQ79 661 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 FAM49BQ9NUQ9 324 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 PARVAQ9NVD7 372 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.38□□□□□ -0.75
TPM3-210ENST00000368530 INVSQ9Y283 1065 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 SCINQ9Y6U3 715 aa10.38□□□□□ -0.75
TPM3-210ENST00000368530 MIF4GDA9UHW6 222 aaKnown RBP10.37□□□□□ -0.75
TPM3-210ENST00000368530 MYO1FO00160 1098 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 O00370 1275 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 PIK3R2O00459 728 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 RHOBTB1O94844 696 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 OLFM2O95897 454 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 FGGP02679 453 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 BCKDHBP21953 392 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 CDH5P33151 784 aaPredicted RBP10.37□□□□□ -0.75
TPM3-210ENST00000368530 GJC1P36383 396 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 SSR1P43307 286 aaKnown RBP10.37□□□□□ -0.75
TPM3-210ENST00000368530 IFNAR2P48551 515 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 DGKEP52429 567 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 VSNL1P62760 191 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 SLC7A5Q01650 507 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 CREB5Q02930 508 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 CNGA2Q16280 664 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 LONRF2Q1L5Z9 754 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 CCDC70Q6NSX1 233 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 PSAPL1Q6NUJ1 521 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 SPATA2LQ8IUW3 424 aaPredicted RBP10.37□□□□□ -0.75
TPM3-210ENST00000368530 SCN4BQ8IWT1 228 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 TTC39CQ8N584 583 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 ACTRT1Q8TDG2 376 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 ACDQ96AP0 544 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 MCEEQ96PE7 176 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 EDEM2Q9BV94 578 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 TTLL2Q9BWV7 592 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 LHX5Q9H2C1 402 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 SNX25Q9H3E2 840 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 TMEM30AQ9NV96 361 aa10.37□□□□□ -0.75
TPM3-210ENST00000368530 RALYQ9UKM9 306 aaKnown RBP10.37□□□□□ -0.75
TPM3-210ENST00000368530 ASPMQ8IZT6 3477 aa10.36□□□□□ -0.75
TPM3-210ENST00000368530 A0A0A0MRY4 1105 aa10.36□□□□□ -0.75
TPM3-210ENST00000368530 PATE3B3GLJ2 98 aa10.36□□□□□ -0.75
TPM3-210ENST00000368530 KRIT1O00522 736 aa10.36□□□□□ -0.75
TPM3-210ENST00000368530 PROSCO94903 275 aa10.36□□□□□ -0.75
TPM3-210ENST00000368530 ERBB2P04626 1255 aa10.36□□□□□ -0.75
TPM3-210ENST00000368530 PROS1P07225 676 aa10.36□□□□□ -0.75
TPM3-210ENST00000368530 CTNNA2P26232 953 aa10.36□□□□□ -0.75
TPM3-210ENST00000368530 PCSK1P29120 753 aa10.36□□□□□ -0.75
TPM3-210ENST00000368530 CTNNA1P35221 906 aaKnown RBP10.36□□□□□ -0.75
TPM3-210ENST00000368530 RGS7P49802 495 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms