RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 SPATA13Q96N96 652 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 OSMRQ99650 979 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 CCDC106Q9BWC9 280 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 CPSF2Q9P2I0 782 aaKnown RBP12.68□□□□□ -0.38
PTPN7-202ENST00000367279 SOX13Q9UN79 622 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 E9PBE3 544 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 CLDN5O00501 218 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 NEMP1O14524 444 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 KLHL41O60662 606 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 MAGEC1O60732 1142 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 HSPA4LO95757 839 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 GNAT1P11488 350 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 ARHGAP1Q07960 439 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 BST2Q10589 180 aaKnown RBP12.68□□□□□ -0.38
PTPN7-202ENST00000367279 WASHC5Q12768 1159 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 DPYSL2Q16555 572 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 TRMT5Q32P41 509 aaKnown RBP12.68□□□□□ -0.38
PTPN7-202ENST00000367279 NET1Q7Z628 596 aaPredicted RBP12.68□□□□□ -0.38
PTPN7-202ENST00000367279 TTC39CQ8N584 583 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 OR52K1Q8NGK4 314 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 MED10Q9BTT4 135 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 NXF3Q9H4D5 531 aaKnown RBP12.68□□□□□ -0.38
PTPN7-202ENST00000367279 CAB39LQ9H9S4 337 aa12.68□□□□□ -0.38
PTPN7-202ENST00000367279 MRPL42Q9Y6G3 142 aaKnown RBP12.68□□□□□ -0.38
PTPN7-202ENST00000367279 TNS1Q9HBL0 1735 aaKnown RBP12.68□□□□□ -0.38
PTPN7-202ENST00000367279 GOLGA8QA0A0J9YX86 632 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 GOLGA8OA6NCC3 632 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 GOLGA8NF8WBI6 632 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 M0QYT0 321 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 RALBP11234 206 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 TEDDM1Q5T9Z0 273 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 KYAT3Q6YP21 454 aaKnown RBP12.67□□□□□ -0.38
PTPN7-202ENST00000367279 ZNF778Q96MU6 729 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 GBP5Q96PP8 586 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 PRDM12Q9H4Q4 367 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 MTMR10Q9NXD2 777 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 BIRC5O15392 142 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 DCXO43602 365 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 PLIN3O60664 434 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 SNNO75324 88 aaPredicted RBP12.67□□□□□ -0.38
PTPN7-202ENST00000367279 GSTA2P09210 222 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 FGF3P11487 239 aaPredicted RBP12.67□□□□□ -0.38
PTPN7-202ENST00000367279 NR2C2P49116 596 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 COPAP53621 1224 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 BCAT1P54687 386 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 SEMA5AQ13591 1074 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 LAMC2Q13753 1193 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 GRIK4Q16099 956 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 MBLAC2Q68D91 279 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 PDPK2PQ6A1A2 396 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 UBP1Q9NZI7 540 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 EMCNQ9ULC0 261 aa12.67□□□□□ -0.38
PTPN7-202ENST00000367279 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.66□□□□□ -0.38
PTPN7-202ENST00000367279 GARSP41250 739 aaKnown RBP12.66□□□□□ -0.38
PTPN7-202ENST00000367279 RAP1GDS1P52306 607 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 PGGT1BP53609 377 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 DSG1Q02413 1049 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 ASPHQ12797 758 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 POTEAQ6S8J7 498 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 ISLR2Q6UXK2 745 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 C4orf22Q6V702 233 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 OXCT2Q9BYC2 517 aaPredicted RBP12.66□□□□□ -0.38
PTPN7-202ENST00000367279 MOCS1Q9NZB8 636 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 PPP2R3BQ9Y5P8 575 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 SIN3BO75182 1162 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 RECQL4O94761 1208 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 SERPINE1P05121 402 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 POLBP06746 335 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 SETSIPP0DME0 302 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 TPH1P17752 444 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 FDFT1P37268 417 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 NDUFV1P49821 464 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 ATXN3P54252 364 aaPredicted RBP12.66□□□□□ -0.38
PTPN7-202ENST00000367279 PCLAFQ15004 111 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 DLG2Q15700 870 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 FAM187BQ17R55 369 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 EFHC1Q5JVL4 640 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 LPCAT4Q643R3 524 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 RAPH1Q70E73 1250 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 ARCQ7LC44 396 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 STRA8Q7Z7C7 330 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 CCNJLQ8IV13 435 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 DEFB107AQ8IZN7 70 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 RNF139Q8WU17 664 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 CDHR5Q9HBB8 845 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 LRRC4Q9HBW1 653 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 DCDC2Q9UHG0 476 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 A0A0G2JLL6 359 aaPredicted RBP12.66□□□□□ -0.38
PTPN7-202ENST00000367279 ASB14A6NK59 587 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 CPA3P15088 417 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 PGAM1P18669 254 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 GRM5P41594 1212 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 ACTR3P61158 418 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 KYAT1Q16773 422 aa12.66□□□□□ -0.38
PTPN7-202ENST00000367279 PRRT2Q7Z6L0 340 aaPredicted RBP12.66□□□□□ -0.38
PTPN7-202ENST00000367279 MAGEA13PA6NCF6 341 aa12.65□□□□□ -0.38
PTPN7-202ENST00000367279 EEF2KO00418 725 aaKnown RBP12.65□□□□□ -0.38
PTPN7-202ENST00000367279 OPHN1O60890 802 aa12.65□□□□□ -0.38
PTPN7-202ENST00000367279 IL1BP01584 269 aa12.65□□□□□ -0.38
PTPN7-202ENST00000367279 MX2P20592 715 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms