RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 UQCRBP14927 111 aa19.34■□□□□ 0.69
PSPC1-201ENST00000338910 CCNFP41002 786 aa19.34■□□□□ 0.69
PSPC1-201ENST00000338910 FCGRTP55899 365 aa19.34■□□□□ 0.69
PSPC1-201ENST00000338910 CDK18Q07002 472 aa19.34■□□□□ 0.69
PSPC1-201ENST00000338910 USP4Q13107 963 aa19.34■□□□□ 0.69
PSPC1-201ENST00000338910 SOWAHAQ2M3V2 549 aa19.34■□□□□ 0.69
PSPC1-201ENST00000338910 C9orf57Q5W0N0 161 aa19.34■□□□□ 0.69
PSPC1-201ENST00000338910 GSTCDQ8NEC7 633 aa19.34■□□□□ 0.69
PSPC1-201ENST00000338910 SHKBP1Q8TBC3 707 aa19.34■□□□□ 0.69
PSPC1-201ENST00000338910 MECRQ9BV79 373 aa19.34■□□□□ 0.69
PSPC1-201ENST00000338910 EPB41L1Q9H4G0 881 aa19.34■□□□□ 0.69
PSPC1-201ENST00000338910 USP18Q9UMW8 372 aa19.34■□□□□ 0.69
PSPC1-201ENST00000338910 SMIM28A0A1B0GU29 152 aa19.33■□□□□ 0.69
PSPC1-201ENST00000338910 SMIM31A0A1B0GVY4 71 aa19.33■□□□□ 0.69
PSPC1-201ENST00000338910 PRR5-ARHGAP8B1AHC4 643 aa19.33■□□□□ 0.69
PSPC1-201ENST00000338910 PDGFRBP09619 1106 aa19.33■□□□□ 0.69
PSPC1-201ENST00000338910 CYBAP13498 195 aa19.33■□□□□ 0.69
PSPC1-201ENST00000338910 PDGFRAP16234 1089 aa19.33■□□□□ 0.69
PSPC1-201ENST00000338910 ARHGAP8P85298 464 aa19.33■□□□□ 0.69
PSPC1-201ENST00000338910 OTUD4Q01804 1114 aaKnown RBP19.33■□□□□ 0.69
PSPC1-201ENST00000338910 CDO1Q16878 200 aa19.33■□□□□ 0.69
PSPC1-201ENST00000338910 C15orf59Q2T9L4 293 aaPredicted RBP19.33■□□□□ 0.69
PSPC1-201ENST00000338910 TRNP1Q6NT89 227 aa19.33■□□□□ 0.69
PSPC1-201ENST00000338910 CXCL17Q6UXB2 119 aa19.33■□□□□ 0.69
PSPC1-201ENST00000338910 TTC30AQ86WT1 665 aa19.33■□□□□ 0.69
PSPC1-201ENST00000338910 RXFP2Q8WXD0 754 aa19.33■□□□□ 0.69
PSPC1-201ENST00000338910 ETNK2Q9NVF9 386 aa19.33■□□□□ 0.69
PSPC1-201ENST00000338910 COPEO14579 308 aa19.33■□□□□ 0.68
PSPC1-201ENST00000338910 INHBCP55103 352 aa19.33■□□□□ 0.68
PSPC1-201ENST00000338910 PDE1BQ01064 536 aa19.33■□□□□ 0.68
PSPC1-201ENST00000338910 TRIM32Q13049 653 aa19.33■□□□□ 0.68
PSPC1-201ENST00000338910 TEX44Q53QW1 395 aa19.33■□□□□ 0.68
PSPC1-201ENST00000338910 SCUBE3Q8IX30 993 aa19.33■□□□□ 0.68
PSPC1-201ENST00000338910 TAB3Q8N5C8 712 aaPredicted RBP19.33■□□□□ 0.68
PSPC1-201ENST00000338910 DPEP3Q9H4B8 488 aa19.33■□□□□ 0.68
PSPC1-201ENST00000338910 GOLGA2P5Q9HBQ8 144 aa19.33■□□□□ 0.68
PSPC1-201ENST00000338910 ASNSD1Q9NWL6 643 aa19.33■□□□□ 0.68
PSPC1-201ENST00000338910 GALNT8Q9NY28 637 aa19.33■□□□□ 0.68
PSPC1-201ENST00000338910 XPO7Q9UIA9 1087 aaKnown RBP19.33■□□□□ 0.68
PSPC1-201ENST00000338910 TMEM88BA6NKF7 163 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 ATP9BO43861 1147 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 TRUB2O95900 331 aaKnown RBP19.32■□□□□ 0.68
PSPC1-201ENST00000338910 ASLP04424 464 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 ELK3P41970 407 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 ZNF143P52747 638 aaPredicted RBP19.32■□□□□ 0.68
PSPC1-201ENST00000338910 AQP5P55064 265 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 TMPRSS15P98073 1019 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 CAP1Q01518 475 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 PCBP1Q15365 356 aaKnown RBP eCLIP19.32■□□□□ 0.68
PSPC1-201ENST00000338910 SATL1Q86VE3 508 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 TRIM42Q8IWZ5 723 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 LRRC52Q8N7C0 313 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 KLHL23Q8NBE8 558 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 PYDC1Q8WXC3 89 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 CALN1Q9BXU9 219 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 IQCGQ9H095 443 aaKnown RBP19.32■□□□□ 0.68
PSPC1-201ENST00000338910 ZNF395Q9H8N7 513 aaPredicted RBP19.32■□□□□ 0.68
PSPC1-201ENST00000338910 GPBP1L1Q9HC44 474 aaPredicted RBP19.32■□□□□ 0.68
PSPC1-201ENST00000338910 SIRPGQ9P1W8 387 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 SOX13Q9UN79 622 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 PLLPQ9Y342 182 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 FAM155BO75949 473 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 ATP5BP06576 529 aaKnown RBP19.32■□□□□ 0.68
PSPC1-201ENST00000338910 VCLP18206 1134 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 GPD1P21695 349 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 HOXC8P31273 242 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 ALDH18A1P54886 795 aaKnown RBP19.32■□□□□ 0.68
PSPC1-201ENST00000338910 XIAPP98170 497 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 PRKCZQ05513 592 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 LRRC36Q1X8D7 754 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 EFHC1Q5JVL4 640 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 MFSD14CQ5VZR4 134 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 ATG16L1Q676U5 607 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 E2F7Q96AV8 911 aa19.32■□□□□ 0.68
PSPC1-201ENST00000338910 UBQLN1Q9UMX0 589 aaKnown RBP19.32■□□□□ 0.68
PSPC1-201ENST00000338910 C2CD4BA6NLJ0 364 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 SPTLC1O15269 473 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 SERPINA6P08185 405 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 AXLP30530 894 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 AQP4P55087 323 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 MAP7Q14244 749 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 UBXN11Q5T124 520 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 ZNF618Q5T7W0 954 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 CMASQ8NFW8 434 aaPredicted RBP19.31■□□□□ 0.68
PSPC1-201ENST00000338910 PEBP4Q96S96 227 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 KLHL4Q9C0H6 718 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 FAM124BQ9H5Z6 455 aaPredicted RBP19.31■□□□□ 0.68
PSPC1-201ENST00000338910 KBTBD13C9JR72 458 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 OR6B1O95007 311 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 AOC1P19801 751 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 LMO2P25791 158 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 CRYBB1P53674 252 aaPredicted RBP19.31■□□□□ 0.68
PSPC1-201ENST00000338910 GJA9P57773 515 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 DLG1Q12959 904 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 FBXO47Q5MNV8 452 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 LPCAT4Q643R3 524 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 TRIM74Q86UV6 250 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 TRIM73Q86UV7 250 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 RFX6Q8HWS3 928 aa19.31■□□□□ 0.68
PSPC1-201ENST00000338910 RSAD2Q8WXG1 361 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms