RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 POLD3Q15054 466 aaPredicted RBP14.06□□□□□ -0.16
RTN4-202ENST00000337526 ZACNQ401N2 412 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 CYP2R1Q6VVX0 501 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 USP6NLQ92738 828 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 NSMCE2Q96MF7 247 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 NDUFAF1Q9Y375 327 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 TSC22D4Q9Y3Q8 395 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 CASTOR2A6NHX0 329 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 CHADO15335 359 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 RGS5O15539 181 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 ARIH2O95376 493 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 FGRP09769 529 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 ERVK-10P10266 1014 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 FLT3P36888 993 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 SKIV2L2P42285 1042 aaKnown RBP14.06□□□□□ -0.16
RTN4-202ENST00000337526 NAGLUP54802 743 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 SLC20A2Q08357 652 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 BST1Q10588 318 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 TRAF2Q12933 501 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 HGSNATQ68CP4 663 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 PLEKHA7Q6IQ23 1121 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 NUDT18Q6ZVK8 323 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 MIER2Q8N344 545 aa14.06□□□□□ -0.16
RTN4-202ENST00000337526 RMND5BQ96G75 393 aaPredicted RBP14.06□□□□□ -0.16
RTN4-202ENST00000337526 RGS2P41220 211 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 MRPL28Q13084 256 aaKnown RBP14.05□□□□□ -0.16
RTN4-202ENST00000337526 HIST2H2ACQ16777 129 aaPredicted RBP14.05□□□□□ -0.16
RTN4-202ENST00000337526 HIST2H2AA3Q6FI13 130 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 TFAP2DQ7Z6R9 452 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 PLEKHH3Q7Z736 793 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 AKT1S1Q96B36 256 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 TRAPPC9Q96Q05 1148 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 COLEC11Q9BWP8 271 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 TUBGCP4Q9UGJ1 667 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 DSEQ9UL01 958 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 SORCS3Q9UPU3 1222 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 RBAK-RBAKDNI3L0D1 243 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 CLOCKO15516 846 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 ITGALP20701 1170 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 GRIK4Q16099 956 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 BBS12Q6ZW61 710 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 NT5DC4Q86YG4 428 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 ZNF398Q8TD17 642 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 POLG2Q9UHN1 485 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 PHGDHO43175 533 aaKnown RBP14.05□□□□□ -0.16
RTN4-202ENST00000337526 ITGB5P18084 799 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 ABCG1P45844 678 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 ALDH7A1P49419 539 aaKnown RBP14.05□□□□□ -0.16
RTN4-202ENST00000337526 MMP14P50281 582 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 PAWRQ96IZ0 340 aaKnown RBP14.05□□□□□ -0.16
RTN4-202ENST00000337526 KCTD14Q9BQ13 255 aaPredicted RBP14.05□□□□□ -0.16
RTN4-202ENST00000337526 UBXN6Q9BZV1 441 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 FHDC1Q9C0D6 1143 aaPredicted RBP14.05□□□□□ -0.16
RTN4-202ENST00000337526 TMEM245Q9H330 911 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 TMEM134Q9H6X4 195 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 ACTR8Q9H981 624 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 ZNF682O95780 498 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 ITGAVP06756 1048 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 GLRA2P23416 452 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 PTDSS1P48651 473 aaKnown RBP14.05□□□□□ -0.16
RTN4-202ENST00000337526 PKNOX1P55347 436 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 NOMO3P69849 1222 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 MRPS22P82650 360 aaKnown RBP14.05□□□□□ -0.16
RTN4-202ENST00000337526 PARP6Q2NL67 630 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 ANKS6Q68DC2 871 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 NPNTQ6UXI9 565 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 GLMNQ92990 594 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 VAT1Q99536 393 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 ACSS3Q9H6R3 686 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 HPS4Q9NQG7 708 aa14.05□□□□□ -0.16
RTN4-202ENST00000337526 DDX18Q9NVP1 670 aaKnown RBP14.05□□□□□ -0.16
RTN4-202ENST00000337526 CTXN3Q4LDR2 81 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 PHF13Q86YI8 300 aaPredicted RBP14.04□□□□□ -0.16
RTN4-202ENST00000337526 LZTR1Q8N653 840 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 FAM120BQ96EK7 910 aaKnown RBP14.04□□□□□ -0.16
RTN4-202ENST00000337526 BDH2Q9BUT1 245 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 RGS18Q9NS28 235 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 C3P01024 1663 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 TSPAN3O60637 253 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 SNUPNO95149 360 aaKnown RBP14.04□□□□□ -0.16
RTN4-202ENST00000337526 TUBP50607 506 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 ZNF143P52747 638 aaPredicted RBP14.04□□□□□ -0.16
RTN4-202ENST00000337526 CRADDP78560 199 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 PPIDQ08752 370 aaKnown RBP14.04□□□□□ -0.16
RTN4-202ENST00000337526 OVOS1Q6IE37 1185 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 C15orf52Q6ZUT6 534 aaKnown RBP14.04□□□□□ -0.16
RTN4-202ENST00000337526 SLC25A23Q9BV35 468 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 PTPRHQ9HD43 1115 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 MID1IP1Q9NPA3 183 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 CBX4O00257 560 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 RAMP2O60895 175 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 DNAJB2P25686 324 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 SLC25A3Q00325 362 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 VAC14Q08AM6 782 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 NAB1Q13506 487 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 HYIQ5T013 277 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 FKBP1CQ5VVH2 108 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 FBXO39Q8N4B4 442 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 ATG16L2Q8NAA4 619 aa14.04□□□□□ -0.16
RTN4-202ENST00000337526 ZSCAN18Q8TBC5 510 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms