RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 RSAD2Q8WXG1 361 aa11.21□□□□□ -0.61
LSM3-201ENST00000306024 SEPT8Q92599 483 aa11.21□□□□□ -0.61
LSM3-201ENST00000306024 LPPQ93052 612 aa11.21□□□□□ -0.61
LSM3-201ENST00000306024 MED10Q9BTT4 135 aa11.21□□□□□ -0.61
LSM3-201ENST00000306024 KLHL11Q9NVR0 708 aa11.21□□□□□ -0.61
LSM3-201ENST00000306024 TUBA8Q9NY65 449 aaPredicted RBP11.21□□□□□ -0.61
LSM3-201ENST00000306024 SLC7A8Q9UHI5 535 aa11.21□□□□□ -0.61
LSM3-201ENST00000306024 ARVCFO00192 962 aa11.21□□□□□ -0.62
LSM3-201ENST00000306024 HAS3O00219 553 aa11.21□□□□□ -0.62
LSM3-201ENST00000306024 CRABP2P29373 138 aa11.21□□□□□ -0.62
LSM3-201ENST00000306024 GRM5P41594 1212 aa11.21□□□□□ -0.62
LSM3-201ENST00000306024 NUP107P57740 925 aa11.21□□□□□ -0.62
LSM3-201ENST00000306024 ACTR3P61158 418 aa11.21□□□□□ -0.62
LSM3-201ENST00000306024 KLHL35Q6PF15 583 aa11.21□□□□□ -0.62
LSM3-201ENST00000306024 PDIK1LQ8N165 341 aa11.21□□□□□ -0.62
LSM3-201ENST00000306024 SEMA4DQ92854 862 aa11.21□□□□□ -0.62
LSM3-201ENST00000306024 NFKBIZQ9BYH8 718 aa11.21□□□□□ -0.62
LSM3-201ENST00000306024 FOXP3Q9BZS1 431 aa11.21□□□□□ -0.62
LSM3-201ENST00000306024 SLC38A7Q9NVC3 462 aa11.21□□□□□ -0.62
LSM3-201ENST00000306024 MAD1L1Q9Y6D9 718 aa11.21□□□□□ -0.62
LSM3-201ENST00000306024 PLXNB2O15031 1838 aa11.21□□□□□ -0.62
LSM3-201ENST00000306024 MBLAC1A4D2B0 266 aaPredicted RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 TMEM247A6NEH6 219 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 SIGLEC16A6NMB1 481 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 PI4K2BG5E9Z4 385 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 ZC3H11AO75152 810 aaKnown RBP eCLIP11.2□□□□□ -0.62
LSM3-201ENST00000306024 POMCP01189 267 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 S100BP04271 92 aaPredicted RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 HOXD8P13378 290 aaPredicted RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 COPAP53621 1224 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 OXCT1P55809 520 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 PTK7Q13308 1070 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 EFCAB3Q8N7B9 438 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 PLEKHO2Q8TD55 490 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 ERLEC1Q96DZ1 483 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 FBXL18Q96ME1 805 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 PANX3Q96QZ0 392 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 CORO1BQ9BR76 489 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 TSEN34Q9BSV6 310 aaKnown RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 MRPS26Q9BYN8 205 aaKnown RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 DCLK3Q9C098 648 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 TLE6Q9H808 572 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 FAM105AQ9NUU6 356 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 RBMX2Q9Y388 322 aaKnown RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 PCDHA3Q9Y5H8 950 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 THP07101 528 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 HOXD12P35452 270 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 NR1H2P55055 460 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 DYNLT1P63172 113 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 PDAP1Q13442 181 aaKnown RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 PAN2Q504Q3 1202 aaKnown RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 ZNF618Q5T7W0 954 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 SERINC5Q86VE9 423 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 METTL23Q86XA0 190 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 ZC3H3Q8IXZ2 948 aaKnown RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 NUP93Q8N1F7 819 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 LRRC43Q8N309 656 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 SMYD1Q8NB12 490 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 JADE3Q92613 823 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 PAFAH2Q99487 392 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 SLC17A7Q9P2U7 560 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 SLC24A2Q9UI40 661 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 MATN2O00339 956 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 CDK4P11802 303 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 BASP1P80723 227 aaKnown RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 KRT72Q14CN4 511 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 CHI3L2Q15782 390 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 AMHR2Q16671 573 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 FAM187BQ17R55 369 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 PRR11Q96HE9 360 aaPredicted RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 MAK16Q9BXY0 300 aaKnown RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 VPS11Q9H270 941 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 XAB2Q9HCS7 855 aaKnown RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 AAASQ9NRG9 546 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 RSL24D1Q9UHA3 163 aaKnown RBP11.2□□□□□ -0.62
LSM3-201ENST00000306024 IPPQ9Y573 584 aa11.2□□□□□ -0.62
LSM3-201ENST00000306024 TM9SF1O15321 606 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 B3GAT3O94766 335 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 PDGFRBP09619 1106 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 IQCF3P0C7M6 154 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 CHRNB2P17787 502 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 ALDH1A3P47895 512 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 PRAMEP78395 509 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 ADRM1Q16186 407 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 INAQ16352 499 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 C6orf183Q5T699 404 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 ITPRIPL1Q6GPH6 555 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 TREML1Q86YW5 311 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 PPM1NQ8N819 430 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 CATSPER1Q8NEC5 780 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 NCSTNQ92542 709 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 E2F7Q96AV8 911 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 SERPINI1Q99574 410 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 BRD8Q9H0E9 1235 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 UPF3AQ9H1J1 476 aaKnown RBP11.19□□□□□ -0.62
LSM3-201ENST00000306024 HIPK3Q9H422 1215 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 GPAMQ9HCL2 828 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 WBP1LQ9NX94 342 aa11.19□□□□□ -0.62
LSM3-201ENST00000306024 UVRAGQ9P2Y5 699 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms