RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 SIX4Q9UIU6 781 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 CPSF3Q9UKF6 684 aaKnown RBP13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 SPDYE16A6NNV3 312 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 ABLIM1O14639 778 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 GPC4O75487 556 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 FARP2O94887 1054 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 STBD1O95210 358 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 ITGBL1O95965 494 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 CHRNGP07510 517 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 IRF9Q00978 393 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 ZNF460Q14592 562 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 RELL1Q8IUW5 271 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 ADGRF2Q8IZF7 708 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 LENG8Q96PV6 779 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 CDK5RAP2Q96SN8 1893 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 A0A096LPK6 155 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 KLHL33A6NCF5 533 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 SDR42E2A6NKP2 422 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 C3orf70A6NLC5 250 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 C9JVG2 144 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 M0QYT0 321 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 SPAG6O75602 509 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 VDRP11473 427 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 TGM2P21980 687 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 MPSTP25325 297 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 GPD2P43304 727 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 SLC12A2P55011 1212 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 PDE1CQ14123 709 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 CNPY1Q3B7I2 92 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 TRNP1Q6NT89 227 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 ZPBP2Q6X784 338 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 PAF1Q8N7H5 531 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 AGBL3Q8NEM8 1001 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 HTR3CQ8WXA8 447 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 PPP2R3CQ969Q6 453 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 C18orf25Q96B23 403 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 CMTM5Q96DZ9 223 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 MFSD3Q96ES6 412 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 XYLT2Q9H1B5 865 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 BFARQ9NZS9 450 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 CLDN5O00501 218 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 CHADO15335 359 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 SUPT3HO75486 399 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 KLHL2O95198 593 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 ITGA2BP08514 1039 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 AP3M2P53677 418 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 CACNB2Q08289 660 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 PDK1Q15118 436 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 PDK3Q15120 406 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 PAN2Q504Q3 1202 aaKnown RBP13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 KRT80Q6KB66 452 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 RPS27LQ71UM5 84 aaKnown RBP13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 TDRD5Q8NAT2 981 aaKnown RBP13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 CMASQ8NFW8 434 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 EME1Q96AY2 570 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 PCYT2Q99447 389 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 COG4Q9H9E3 785 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 CYLDQ9NQC7 956 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 ARHGAP26Q9UNA1 814 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 CSADQ9Y600 493 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 TRAFD1O14545 582 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 ETFBP38117 255 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 ACTR3P61158 418 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 PITX1P78337 314 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 KCNJ11Q14654 390 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 NET1Q7Z628 596 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 PQLC3Q8N755 202 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 SLC7A14Q8TBB6 771 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 EDEM1Q92611 657 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 PRDM12Q9H4Q4 367 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 S100A14Q9HCY8 104 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 ADAMTS6Q9UKP5 1117 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 SNX10Q9Y5X0 201 aa13.66□□□□□ -0.22
TNFRSF21-201ENST00000296861 ATP6AP2A0A1C7CYW4 349 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 ACKR2O00590 384 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 HNRNPRO43390 633 aaKnown RBP13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 ATP6AP2O75787 350 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 SERPINA6P08185 405 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 CD1EP15812 388 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 VCLP18206 1134 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 INHBEP58166 350 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 RBP5P82980 135 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 SLC10A2Q12908 348 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 PRPSAP1Q14558 356 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 STILQ15468 1287 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 PCSK7Q16549 785 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 SLC9B1Q4ZJI4 515 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 CERCAMQ5T4B2 595 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 C6orf52Q5T4I8 152 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 FOXB2Q5VYV0 432 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 PACS1Q6VY07 963 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 SIX6OS1Q8N1H7 587 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 TRAPPC9Q96Q05 1148 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 GMLQ99445 158 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 CHST12Q9NRB3 414 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 CDH22Q9UJ99 828 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 RPL26L1Q9UNX3 145 aaKnown RBP13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 AURKCQ9UQB9 309 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 GOLGA4Q13439 2230 aaKnown RBP13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 C2CD4BA6NLJ0 364 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms