RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ZNF786Q8N393 782 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 SPATA20Q8TB22 786 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 OMDQ99983 421 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 PTPN1P18031 435 aaKnown RBP17.67■□□□□ 0.42
SHANK1-201ENST00000293441 SPANXN3Q5MJ09 141 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 ARMC12Q5T9G4 340 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 IRAK1BP1Q5VVH5 260 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 CES5AQ6NT32 575 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 FBXL19Q6PCT2 694 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 TEX9Q8N6V9 391 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 SKA1Q96BD8 255 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 PARVBQ9HBI1 364 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 HES2Q9Y543 173 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 ELK3P41970 407 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 AGKQ53H12 422 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 CDKAL1Q5VV42 579 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 MAP4K3Q8IVH8 894 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 AHSPQ9NZD4 102 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 ZMYM5Q9UJ78 669 aa17.67■□□□□ 0.42
SHANK1-201ENST00000293441 PRLRP16471 622 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 INHBEP58166 350 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 DGKZQ13574 1117 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 MOB2Q70IA6 237 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 GPR142Q7Z601 462 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 GRIN3AQ8TCU5 1115 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 KCTD14Q9BQ13 255 aaPredicted RBP17.66■□□□□ 0.42
SHANK1-201ENST00000293441 CORO1BQ9BR76 489 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 GANQ9H2C0 597 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 TRHDEQ9UKU6 1024 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 TRAV19A0A0A6YYK7 116 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 ATP5BP06576 529 aaKnown RBP17.66■□□□□ 0.42
SHANK1-201ENST00000293441 PGAM1P18669 254 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 MMP13P45452 471 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 DEFB115Q30KQ5 88 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 FKBP1CQ5VVH2 108 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 ZNF470Q6ECI4 717 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 NYAP1Q6ZVC0 841 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 FBXO39Q8N4B4 442 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 HELQQ8TDG4 1101 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 GCNT1Q02742 428 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 POM121L1PQ3SYA9 428 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 KIAA0319LQ8IZA0 1049 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 LZTR1Q8N653 840 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 SNX13Q9Y5W8 968 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 VAPBO95292 243 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 PSMA3P25788 255 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 GTF2E2P29084 291 aaKnown RBP17.66■□□□□ 0.42
SHANK1-201ENST00000293441 MIPP30301 263 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 ATP5C1P36542 298 aaKnown RBP17.66■□□□□ 0.42
SHANK1-201ENST00000293441 KDM7AQ6ZMT4 941 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 LPPQ93052 612 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 MTFMTQ96DP5 389 aaKnown RBP17.66■□□□□ 0.42
SHANK1-201ENST00000293441 FAM120BQ96EK7 910 aaKnown RBP17.66■□□□□ 0.42
SHANK1-201ENST00000293441 NR2E3Q9Y5X4 410 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 WTIPA6NIX2 430 aaPredicted RBP17.66■□□□□ 0.42
SHANK1-201ENST00000293441 HMGCRP04035 888 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 CTSEP14091 401 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 CBWD6Q4V339 395 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 N4BP2L1Q5TBK1 243 aaPredicted RBP17.66■□□□□ 0.42
SHANK1-201ENST00000293441 DPY30Q9C005 99 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.66■□□□□ 0.42
SHANK1-201ENST00000293441 FAM153AQ9UHL3 310 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 ZNF711Q9Y462 761 aa17.66■□□□□ 0.42
SHANK1-201ENST00000293441 SLCO1B7G3V0H7 640 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 MSCO60682 206 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 KRT6AP02538 564 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 KRT6BP04259 564 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 PYGMP11217 842 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 SP100P23497 879 aaPredicted RBP17.65■□□□□ 0.42
SHANK1-201ENST00000293441 KRT6CP48668 564 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 NPY2RP49146 381 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 XRCC4Q13426 336 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 SRLQ86TD4 932 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 ANKRD49Q8WVL7 239 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 C1QTNF7Q9BXJ2 289 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 TAS2R13Q9NYV9 303 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 ZNF112Q9UJU3 913 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 SHOC2Q9UQ13 582 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.65■□□□□ 0.42
SHANK1-201ENST00000293441 TYMPP19971 482 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 SLC1A6P48664 564 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 TBCBQ99426 244 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 SH3BGRLO75368 114 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 TOMM70O94826 608 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 CALCAP01258 141 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 RCN1Q15293 331 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 GRIK5Q16478 980 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 PAPD7Q5XG87 772 aaKnown RBP17.65■□□□□ 0.42
SHANK1-201ENST00000293441 SLC24A2Q9UI40 661 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 TMEM114B3SHH9 223 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 IFNA14P01570 189 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 ATP6V1B1P15313 513 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 POLR2LP62875 67 aaKnown RBP17.65■□□□□ 0.42
SHANK1-201ENST00000293441 DLG4P78352 724 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 RAP1GAP2Q684P5 730 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 USP45Q70EL2 814 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 TRAPPC5Q8IUR0 188 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 BBS2Q9BXC9 721 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 PABPC1LQ4VXU2 614 aaKnown RBP17.65■□□□□ 0.42
SHANK1-201ENST00000293441 DET1Q7L5Y6 550 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms