RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CYP4Z1Q86W10 505 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 CHST7Q9NS84 486 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 ETNK2Q9NVF9 386 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 KCNK4Q9NYG8 393 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 ADAM28Q9UKQ2 775 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 TMCO1Q9UM00 188 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 AP3M1Q9Y2T2 418 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 SNX13Q9Y5W8 968 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 FCHO1O14526 889 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 VEGFAP15692 232 aaPredicted RBP13.08□□□□□ -0.32
PTCD1-201ENST00000292478 TUFMP49411 452 aaKnown RBP13.08□□□□□ -0.32
PTCD1-201ENST00000292478 SCNN1BP51168 640 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 CASP5P51878 434 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 CDH8P55286 799 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 POU6F1Q14863 301 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 PKN2Q16513 984 aaKnown RBP13.08□□□□□ -0.32
PTCD1-201ENST00000292478 IL17AQ16552 155 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 ZFP1Q6P2D0 407 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 PALB2Q86YC2 1186 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 ZNF786Q8N393 782 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 EDEM1Q92611 657 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 HSD17B14Q9BPX1 270 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 ELOVL6Q9H5J4 265 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 EPS8L2Q9H6S3 715 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 PCDHB12Q9Y5F1 795 aa13.08□□□□□ -0.32
PTCD1-201ENST00000292478 NCF1BA6NI72 391 aaPredicted RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 NCF1CA8MVU1 366 aaPredicted RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 CABYRO75952 493 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 NCF1P14598 390 aaPredicted RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 CYP2A7P20853 494 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 BMP6P22004 513 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 RXRGP48443 463 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 MRPL28Q13084 256 aaKnown RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 LRRC49Q8IUZ0 686 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 LNX1Q8TBB1 728 aaPredicted RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 SLC4A9Q96Q91 983 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 NRDE2Q9H7Z3 1164 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 COMMD8Q9NX08 183 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 TMCC3Q9ULS5 477 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 TMEM150BA6NC51 233 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 MGAT4DA6NG13 374 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 SNUPNO95149 360 aaKnown RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 GSNP06396 782 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 ADRB2P07550 413 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 PIK3CGP48736 1102 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 CSE1LP55060 971 aaKnown RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 DLG4P78352 724 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 PAN2Q504Q3 1202 aaKnown RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 AGKQ53H12 422 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 MICU2Q8IYU8 434 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 OR56A4Q8NGH8 313 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 INPP5DQ92835 1189 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 KRT87PA6NCN2 255 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 OPLAHO14841 1288 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 ITGAVP06756 1048 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 GRK3P35626 688 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 IFI35P80217 286 aaPredicted RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 TGM3Q08188 693 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 DEPDC1Q5TB30 811 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 FBXO39Q8N4B4 442 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 CELF6Q96J87 481 aaKnown RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 IL22Q9GZX6 179 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 C2CD2Q9Y426 696 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 A0A0A0MRY4 1105 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 LIASO43766 372 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 POMCP01189 267 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 OR1E1P30953 314 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 CHI3L1P36222 383 aaPredicted RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 RAD23AP54725 363 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 FAAP100Q0VG06 881 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 PSTKQ8IV42 348 aaKnown RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 TRIM48Q8IWZ4 208 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 ALLCQ8N6M5 410 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 LPCAT1Q8NF37 534 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 SPATA13Q96N96 652 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 STN1Q9H668 368 aaKnown RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 RGS18Q9NS28 235 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 RABGEF1Q9UJ41 708 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 CROTQ9UKG9 612 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 SPATA31C2B4DYI2 1134 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 F8VP50 259 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 RBAK-RBAKDNI3L0D1 243 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 CSDE1O75534 798 aaKnown RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 ALDH1A2O94788 518 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 ACAT1P24752 427 aaKnown RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 FSCN1Q16658 493 aaKnown RBP13.07□□□□□ -0.32
PTCD1-201ENST00000292478 DEFB132Q7Z7B7 95 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 OSCP1Q8WVF1 389 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 TRAPPC12Q8WVT3 735 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 LENG9Q96B70 501 aa13.07□□□□□ -0.32
PTCD1-201ENST00000292478 C15orf38-AP3S2A0A0A6YYH1 394 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 SASH3O75995 380 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 RBL1P28749 1068 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 CCDC85BQ15834 202 aaPredicted RBP13.06□□□□□ -0.32
PTCD1-201ENST00000292478 ANKS6Q68DC2 871 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 TATDN1Q6P1N9 297 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 ARPINQ7Z6K5 226 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 DEFB107AQ8IZN7 70 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 STK40Q8N2I9 435 aa13.06□□□□□ -0.32
PTCD1-201ENST00000292478 LRRN4CLQ8ND94 238 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms