RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 DSG3P32926 999 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 MGAT5Q09328 741 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 CAMK2GQ13555 558 aaPredicted RBP10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 N4BP2L1Q5TBK1 243 aaPredicted RBP10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 B3GNT6Q6ZMB0 384 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 ERO1BQ86YB8 467 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 CLEC10AQ8IUN9 316 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 SLITRK1Q96PX8 696 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 CDRT15Q96T59 188 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 DPY30Q9C005 99 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 PTPRHQ9HD43 1115 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 RPS6KB2Q9UBS0 482 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 NDUFAF1Q9Y375 327 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 SPACA6W5XKT8 324 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 USP54Q70EL1 1684 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 TPBGLP0DKB5 382 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 SLC2A4P14672 509 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 CCNIQ14094 377 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 CCNG2Q16589 344 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 SPDYCQ5MJ68 293 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 DENND6AQ8IWF6 608 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 SIX5Q8N196 739 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 C2orf69Q8N8R5 385 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 ZSCAN18Q8TBC5 510 aaPredicted RBP10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 TCP10LQ8TDR4 215 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 FNIP1Q8TF40 1166 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 ACOX2Q99424 681 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 UNKQ9C0B0 810 aaKnown RBP10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 CLPBQ9H078 707 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 EHD4Q9H223 541 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 PRDM16Q9HAZ2 1276 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 OSGEPQ9NPF4 335 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 SLC38A7Q9NVC3 462 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 PRMT7Q9NVM4 692 aaPredicted RBP10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 KDM3BQ7LBC6 1761 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 DPPA5A6NC42 116 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 H3BN98 237 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 BIRC5O15392 142 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 PLA2G6O60733 806 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 ACO1P21399 889 aaKnown RBP10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 PAICSP22234 425 aaKnown RBP10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 RRM1P23921 792 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 SKIV2L2P42285 1042 aaKnown RBP10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 YWHAZP63104 245 aaKnown RBP10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 LGALS3BPQ08380 585 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 PDK2Q15119 407 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 PHF21BQ96EK2 531 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 C9orf16Q9BUW7 83 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 TEX13BQ9BXU2 312 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 OSBPL6Q9BZF3 934 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 KLHL28Q9NXS3 571 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 SPATA7Q9P0W8 599 aa10.98□□□□□ -0.65
PKNOX1-201ENST00000291547 ITGB3P05106 788 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 HPGDP15428 266 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 HALP42357 657 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 SLC1A6P48664 564 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 TSNQ15631 228 aaKnown RBP10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 RGS21Q2M5E4 152 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 PPP1R15BQ5SWA1 713 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 ZSWIM2Q8NEG5 633 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 ERAP1Q9NZ08 941 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 CNOT7Q9UIV1 285 aaKnown RBP10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 PIK3CDO00329 1044 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 MTRF1O75570 445 aaKnown RBP10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 JCHAINP01591 159 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 ITGA4P13612 1032 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 CCDC130P13994 396 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 MYL12AP19105 171 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 NOS3P29474 1203 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 HK2P52789 917 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 HERVK_113P62684 666 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 MCL1Q07820 350 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 USP4Q13107 963 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 SBK1Q52WX2 424 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 SNX32Q86XE0 403 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 CDK20Q8IZL9 346 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 C1orf50Q9BV19 199 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 EHD3Q9NZN3 535 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 DRG1Q9Y295 367 aaKnown RBP10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 MYL12BO14950 172 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 RIPK2O43353 540 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 CYP11B1P15538 503 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 AKR1D1P51857 326 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 FASTKQ14296 549 aaKnown RBP10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 MFSD14CQ5VZR4 134 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 SPOCD1Q6ZMY3 1216 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 ACTL9Q8TC94 416 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 RIT2Q99578 217 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 TSEN34Q9BSV6 310 aaKnown RBP10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 GANQ9H2C0 597 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 FLT1P17948 1338 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 LOC100506127A0A0U1RQW1 187 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 TMEM114B3SHH9 223 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 OPLAHO14841 1288 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 RAD51BO15315 384 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 DYNC1LI2O43237 492 aaPredicted RBP10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 DCXO43602 365 aa10.97□□□□□ -0.65
PKNOX1-201ENST00000291547 GZMAP12544 262 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms