RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 PRDM12Q9H4Q4 367 aa11.88□□□□□ -0.51
CHRNB3-201ENST00000289957 POPDC2Q9HBU9 364 aa11.88□□□□□ -0.51
CHRNB3-201ENST00000289957 PNPLA8Q9NP80 782 aa11.88□□□□□ -0.51
CHRNB3-201ENST00000289957 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.88□□□□□ -0.51
CHRNB3-201ENST00000289957 RWDD3Q9Y3V2 267 aa11.88□□□□□ -0.51
CHRNB3-201ENST00000289957 NOTCH4Q99466 2003 aa11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 TCRBV7S2A1N4TA0A589 114 aa11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 ELF1P32519 619 aa11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 MATKP42679 507 aa11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 SULT1E1P49888 294 aa11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 MLLT1Q03111 559 aaPredicted RBP11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 RIPK1Q13546 671 aa11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 RAB30Q15771 203 aa11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 DNAJB7Q7Z6W7 309 aaPredicted RBP11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 BBOF1Q8ND07 529 aa11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 EPS8L3Q8TE67 593 aaKnown RBP11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 CYP2S1Q96SQ9 504 aa11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 MYCBPQ99417 103 aaPredicted RBP11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 DDX23Q9BUQ8 820 aaKnown RBP11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 CYLDQ9NQC7 956 aa11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 IL37Q9NZH6 218 aa11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 XPO7Q9UIA9 1087 aaKnown RBP11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 SCML2Q9UQR0 700 aa11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 ACTL7BQ9Y614 415 aa11.87□□□□□ -0.51
CHRNB3-201ENST00000289957 M0QYT0 321 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 CAPN9O14815 690 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 TP73O15350 636 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 DAB1O75553 588 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 SDC4P31431 198 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 SLC8A1P32418 973 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 ALDH1A3P47895 512 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 IFI35P80217 286 aaPredicted RBP11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 EFHC1Q5JVL4 640 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 GAREM2Q75VX8 874 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 NETO2Q8NC67 525 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 DQX1Q8TE96 717 aaKnown RBP11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 HSPH1Q92598 858 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 TCEAL4Q96EI5 215 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 SPATA17Q96L03 361 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 CNPY3Q9BT09 278 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 EMILIN2Q9BXX0 1053 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 ZNF576Q9H609 170 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 HAUS2Q9NVX0 235 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 IP6K2Q9UHH9 426 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 ANAPC1Q9H1A4 1944 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 MTCL1Q9Y4B5 1905 aaKnown RBP11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 FAM92AA1XBS5 289 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 FBXO21O94952 628 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 ABHD2P08910 425 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 RDXP35241 583 aaKnown RBP11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 TUFMP49411 452 aaKnown RBP11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 ZXDBP98169 803 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 CYP4F8P98187 520 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 LMNB2Q03252 620 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 UBE3AQ05086 875 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 MMRN1Q13201 1228 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 GRIN2CQ14957 1233 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 MIB1Q86YT6 1006 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 ZDHHC17Q8IUH5 632 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 RIBC1Q8N443 379 aaPredicted RBP11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 GBP7Q8N8V2 638 aaPredicted RBP11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 TTC16Q8NEE8 873 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 C2orf15Q8WU43 125 aaKnown RBP11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 NT5C3BQ969T7 300 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 WBP2Q969T9 261 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 NPY6RQ99463 290 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 FAM118BQ9BPY3 351 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 OXCT2Q9BYC2 517 aaPredicted RBP11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 RNF38Q9H0F5 515 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 IL21Q9HBE4 155 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 USP18Q9UMW8 372 aa11.86□□□□□ -0.51
CHRNB3-201ENST00000289957 PSTPIP1O43586 416 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 SNX3O60493 162 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 GLP2RO95838 553 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 GAS8O95995 478 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 HMBSP08397 361 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 IVDP26440 423 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 RPL10AP62906 217 aaKnown RBP11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 EFEMP1Q12805 493 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 SMARCB1Q12824 385 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 ADGRE1Q14246 886 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 PPP1R7Q15435 360 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 SLC5A9Q2M3M2 681 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 SLC25A52Q3SY17 297 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 TRPM8Q7Z2W7 1104 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 EXOC3L1Q86VI1 746 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 TMC8Q8IU68 726 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 NIPA2Q8N8Q9 360 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 PSMG2Q969U7 264 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 ZNF512Q96ME7 567 aaPredicted RBP11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 CORO1BQ9BR76 489 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 DCLK3Q9C098 648 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 SMG9Q9H0W8 520 aaKnown RBP11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 WDR6Q9NNW5 1121 aaKnown RBP11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 DDIT4Q9NX09 232 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 TPX2Q9ULW0 747 aaKnown RBP11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 OBSL1O75147 1896 aa11.85□□□□□ -0.51
CHRNB3-201ENST00000289957 TLDC2A0PJX2 215 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms