RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 FGD4Q96M96 766 aa9.39□□□□□ -0.91
MSH4-201ENST00000263187 PRMT7Q9NVM4 692 aaPredicted RBP9.39□□□□□ -0.91
MSH4-201ENST00000263187 THAP1Q9NVV9 213 aa9.39□□□□□ -0.91
MSH4-201ENST00000263187 MTMR10Q9NXD2 777 aa9.39□□□□□ -0.91
MSH4-201ENST00000263187 SCN1AP35498 2009 aa9.39□□□□□ -0.91
MSH4-201ENST00000263187 BCLAF3A2AJT9 711 aaKnown RBP9.38□□□□□ -0.91
MSH4-201ENST00000263187 SDR42E2A6NKP2 422 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 FAM159BA6NKW6 160 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 ITGA2BP08514 1039 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 TGM2P21980 687 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 ADCYAP1R1P41586 468 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 DSG1Q02413 1049 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 CDC16Q13042 620 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 GRAMD1BQ3KR37 738 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 HSP90AA5PQ58FG0 334 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 PPM1LQ5SGD2 360 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 MBLAC2Q68D91 279 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 NCBP2-AS2Q69YL0 99 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 FRMD7Q6ZUT3 714 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 CDKL3Q8IVW4 592 aaPredicted RBP9.38□□□□□ -0.91
MSH4-201ENST00000263187 ZNF781Q8N8C0 355 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.38□□□□□ -0.91
MSH4-201ENST00000263187 PPP4R1Q8TF05 950 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 TFB1MQ8WVM0 346 aaKnown RBP9.38□□□□□ -0.91
MSH4-201ENST00000263187 P2RY11Q96G91 374 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 VPS33BQ9H267 617 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 ADAMTS6Q9UKP5 1117 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 ANGPTL2Q9UKU9 493 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 CSADQ9Y600 493 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 MYOCOSA0A1B0GUC4 107 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.38□□□□□ -0.91
MSH4-201ENST00000263187 HBP1O60381 514 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 LYNP07948 512 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 TGFB3P10600 412 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 EDNRBP24530 442 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 SULT1E1P49888 294 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 IDH3AP50213 366 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 AQP4P55087 323 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 ACTR3P61158 418 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 BIRC2Q13490 618 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 PCLAFQ15004 111 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 TRIP10Q15642 601 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 ZRSR2Q15696 482 aaKnown RBP9.38□□□□□ -0.91
MSH4-201ENST00000263187 SFT2D3Q587I9 215 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 RABGAP1LQ5R372 815 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 NAPRTQ6XQN6 538 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 DEFB106AQ8N104 65 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 SNX31Q8N9S9 440 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 USP33Q8TEY7 942 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 USP13Q92995 863 aaPredicted RBP9.38□□□□□ -0.91
MSH4-201ENST00000263187 ZNF669Q96BR6 464 aaPredicted RBP9.38□□□□□ -0.91
MSH4-201ENST00000263187 FCRL3Q96P31 734 aaPredicted RBP9.38□□□□□ -0.91
MSH4-201ENST00000263187 ECSITQ9BQ95 431 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 NXF3Q9H4D5 531 aaKnown RBP9.38□□□□□ -0.91
MSH4-201ENST00000263187 SETD4Q9NVD3 440 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 ERAP1Q9NZ08 941 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 SOX13Q9UN79 622 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 RLFQ13129 1914 aa9.38□□□□□ -0.91
MSH4-201ENST00000263187 TRDMT1O14717 391 aaKnown RBP9.37□□□□□ -0.91
MSH4-201ENST00000263187 LIN7AO14910 233 aaPredicted RBP9.37□□□□□ -0.91
MSH4-201ENST00000263187 PLIN3O60664 434 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 SNNO75324 88 aaPredicted RBP9.37□□□□□ -0.91
MSH4-201ENST00000263187 LGALS2P05162 132 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 CHRNGP07510 517 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 RALBP11234 206 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 ARSAP15289 507 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 COPAP53621 1224 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 ADIGQ0VDE8 80 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 SLC9B1Q4ZJI4 515 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 PDPK2PQ6A1A2 396 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 NXNQ6DKJ4 435 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 SLC35F5Q8WV83 523 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 MFSD3Q96ES6 412 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 OSMRQ99650 979 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 PRDM12Q9H4Q4 367 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 ZNF212Q9UDV6 495 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.37□□□□□ -0.91
MSH4-201ENST00000263187 FAM72CH0Y354 149 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 TSPAN1O60635 241 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 BEST1O76090 585 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 HSPA4LO95757 839 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 LTFP02788 710 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 SERPINA6P08185 405 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 CPOXP36551 454 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 ARL4AP40617 200 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 PKNOX1P55347 436 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 IRX1P78414 480 aaPredicted RBP9.37□□□□□ -0.91
MSH4-201ENST00000263187 DLG1Q12959 904 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 EFHC1Q5JVL4 640 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 CERCAMQ5T4B2 595 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 FAM72AQ5TYM5 149 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 SYPL2Q5VXT5 272 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 TMEM198Q66K66 360 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 FAM72DQ6L9T8 149 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 STRA8Q7Z7C7 330 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 FAM72BQ86X60 149 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 TRIM42Q8IWZ5 723 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 MAPK15Q8TD08 544 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 SGF29Q96ES7 293 aa9.37□□□□□ -0.91
MSH4-201ENST00000263187 GCNAQ96QF7 691 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms