RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 DEUP1Q05D60 604 aa17.37■□□□□ 0.37
SDCBP-201ENST00000260130 MESP2Q0VG99 397 aa17.37■□□□□ 0.37
SDCBP-201ENST00000260130 PPP2R5DQ14738 602 aa17.37■□□□□ 0.37
SDCBP-201ENST00000260130 TSR1Q2NL82 804 aaKnown RBP17.37■□□□□ 0.37
SDCBP-201ENST00000260130 DNAJC24Q6P3W2 148 aa17.37■□□□□ 0.37
SDCBP-201ENST00000260130 RXFP2Q8WXD0 754 aa17.37■□□□□ 0.37
SDCBP-201ENST00000260130 EZH1Q92800 747 aaPredicted RBP17.37■□□□□ 0.37
SDCBP-201ENST00000260130 PRRX2Q99811 253 aa17.37■□□□□ 0.37
SDCBP-201ENST00000260130 IRX2Q9BZI1 471 aaPredicted RBP17.37■□□□□ 0.37
SDCBP-201ENST00000260130 PIGVQ9NUD9 493 aa17.37■□□□□ 0.37
SDCBP-201ENST00000260130 DNAJC17Q9NVM6 304 aaKnown RBP17.37■□□□□ 0.37
SDCBP-201ENST00000260130 ZNHIT6Q9NWK9 470 aaKnown RBP17.37■□□□□ 0.37
SDCBP-201ENST00000260130 CDC23Q9UJX2 597 aa17.37■□□□□ 0.37
SDCBP-201ENST00000260130 FBXO10Q9UK96 956 aa17.37■□□□□ 0.37
SDCBP-201ENST00000260130 HCN4Q9Y3Q4 1203 aa17.37■□□□□ 0.37
SDCBP-201ENST00000260130 A0A0A0MRY4 1105 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 C2CD4BA6NLJ0 364 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 KAT7O95251 611 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 APODP05090 189 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 SDC4P31431 198 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 SLC6A4P31645 630 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 RFC1P35251 1148 aaPredicted RBP17.36■□□□□ 0.37
SDCBP-201ENST00000260130 GRIA2P42262 883 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 CXCR3P49682 368 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 BRD3Q15059 726 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 RFWD3Q6PCD5 774 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 WDR59Q6PJI9 974 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 SND1Q7KZF4 910 aaKnown RBP eCLIP17.36■□□□□ 0.373e-10■■■□□ 16.4
SDCBP-201ENST00000260130 IER2Q9BTL4 223 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 ISCUQ9H1K1 167 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 SPATA6Q9NWH7 488 aaPredicted RBP17.36■□□□□ 0.37
SDCBP-201ENST00000260130 XPO7Q9UIA9 1087 aaKnown RBP17.36■□□□□ 0.37
SDCBP-201ENST00000260130 CCDC151A5D8V7 595 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 K7EQS6 105 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 TRIM24O15164 1050 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 KDSRQ06136 332 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 MTAPQ13126 283 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 MTA1Q13330 715 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 GAS6Q14393 721 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 PIK3R6Q5UE93 754 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 Q6ZS52 159 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 BNIPLQ7Z465 357 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 DNAAF5Q86Y56 855 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 C1orf210Q8IVY1 113 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 PHTF2Q8N3S3 785 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 KCNH6Q9H252 994 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 WDCPQ9H6R7 721 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 ABHD10Q9NUJ1 306 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 ZNF318Q5VUA4 2279 aa17.36■□□□□ 0.37
SDCBP-201ENST00000260130 KMT2EQ8IZD2 1858 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 COL9A1P20849 921 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 CCDC14Q49A88 953 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 BRMS1LQ5PSV4 323 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 PPP1R15BQ5SWA1 713 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 GRAMD4Q6IC98 578 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 MAMSTRQ6ZN01 415 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 NUDT18Q6ZVK8 323 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 CCDC26Q8TAB7 109 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 PARVAQ9NVD7 372 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 MYO1AQ9UBC5 1043 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 A0A087X0T9 212 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 CTAGE9A4FU28 777 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 TBC1D3BA6NDS4 549 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 RNF40O75150 1001 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 ENDOD1O94919 500 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 CISD3P0C7P0 127 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 FAM228BP0C875 321 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 PTPN9P43378 593 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 DGKGP49619 791 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 ATP11AP98196 1134 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 MS4A13Q5J8X5 152 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 ZNF569Q5MCW4 686 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 MPP7Q5T2T1 576 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 TERB1Q8NA31 727 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 EPC1Q9H2F5 836 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 ARHGEF38Q9NXL2 777 aa17.35■□□□□ 0.37
SDCBP-201ENST00000260130 MYOFQ9NZM1 2061 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 ANKRD62A6NC57 917 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 HOXD9P28356 352 aaPredicted RBP17.34■□□□□ 0.37
SDCBP-201ENST00000260130 RDXP35241 583 aaKnown RBP17.34■□□□□ 0.37
SDCBP-201ENST00000260130 EIF4A3P38919 411 aaKnown RBP17.34■□□□□ 0.37
SDCBP-201ENST00000260130 TNFRSF4P43489 277 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 SGSHP51688 502 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 ATXN1P54253 815 aaKnown RBP17.34■□□□□ 0.37
SDCBP-201ENST00000260130 RPL7AP62424 266 aaKnown RBP17.34■□□□□ 0.37
SDCBP-201ENST00000260130 MAMLD1Q13495 774 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 C15orf59Q2T9L4 293 aaPredicted RBP17.34■□□□□ 0.37
SDCBP-201ENST00000260130 MIA3Q5JRA6 1907 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 RAP1GAP2Q684P5 730 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 PLEKHA7Q6IQ23 1121 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 DCUN1D2Q6PH85 259 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 SFTPA1Q8IWL2 248 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 SPEM1Q8N4L4 309 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 TRIM11Q96F44 468 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 MCEEQ96PE7 176 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 SLC2A11Q9BYW1 496 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 TKTL2Q9H0I9 626 aa17.34■□□□□ 0.37
SDCBP-201ENST00000260130 TACR2P21452 398 aa17.33■□□□□ 0.37
SDCBP-201ENST00000260130 GPD1P21695 349 aa17.33■□□□□ 0.37
SDCBP-201ENST00000260130 CDO1Q16878 200 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms