RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CASC4Q6P4E1 433 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 ZNF574Q6ZN55 896 aaPredicted RBP7.94□□□□□ -1.14
GPNMB-201ENST00000258733 SRRM1Q8IYB3 904 aaKnown RBP7.94□□□□□ -1.14
GPNMB-201ENST00000258733 EID3Q8N140 333 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 ZNF321PQ8N8H1 164 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 ZSCAN1Q8NBB4 408 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 DAGLBQ8NCG7 672 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 PIK3R3Q92569 461 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 FEM1CQ96JP0 617 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 MAGEE1Q9HCI5 957 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 HMG20BQ9P0W2 317 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 IGSF9Q9P2J2 1179 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 CNOT6Q9ULM6 557 aaKnown RBP7.94□□□□□ -1.14
GPNMB-201ENST00000258733 GNEQ9Y223 722 aaKnown RBP7.94□□□□□ -1.14
GPNMB-201ENST00000258733 MROH5Q6ZUA9 1318 aa7.94□□□□□ -1.14
GPNMB-201ENST00000258733 TMEM120BA0PK00 339 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 PMS2P1A4D2B8 440 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 SMPD2O60906 423 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 ATP1A1P05023 1023 aaKnown RBP7.93□□□□□ -1.14
GPNMB-201ENST00000258733 HMOX1P09601 288 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 TRIM27P14373 513 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 HOXB8P17481 243 aaPredicted RBP7.93□□□□□ -1.14
GPNMB-201ENST00000258733 TFEBP19484 476 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 POU3F3P20264 500 aaPredicted RBP7.93□□□□□ -1.14
GPNMB-201ENST00000258733 MAOBP27338 520 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 G0S2P27469 103 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 CCND2P30279 289 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 COPZ1P61923 177 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 UBE2IP63279 158 aaKnown RBP7.93□□□□□ -1.14
GPNMB-201ENST00000258733 FMR1Q06787 632 aaKnown RBP eCLIP7.93□□□□□ -1.14
GPNMB-201ENST00000258733 TAF5Q15542 800 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 TRADDQ15628 312 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 ABCB5Q2M3G0 1257 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 PDSS1Q5T2R2 415 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 TLK2Q86UE8 772 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 CLYBLQ8N0X4 340 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 CLEC4FQ8N1N0 589 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 SIMC1Q8NDZ2 872 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 RAB3IL1Q8TBN0 382 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 IFI44Q8TCB0 444 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 ATXN2LQ8WWM7 1075 aaKnown RBP7.93□□□□□ -1.14
GPNMB-201ENST00000258733 PSPC1Q8WXF1 523 aaKnown RBP7.93□□□□□ -1.14
GPNMB-201ENST00000258733 SLC4A9Q96Q91 983 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 PKP4Q99569 1192 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 BARD1Q99728 777 aaKnown RBP7.93□□□□□ -1.14
GPNMB-201ENST00000258733 MROQ9BYG7 248 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 UNC93B1Q9H1C4 597 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 HSD3B7Q9H2F3 369 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 CCDC134Q9H6E4 229 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 DAPK2Q9UIK4 370 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 TRPV2Q9Y5S1 764 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 SESN1Q9Y6P5 492 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 CLUHO75153 1309 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 MLH3Q9UHC1 1453 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 ABCC3O15438 1527 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 ERVV-1B6SEH8 477 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 CFAP99D6REC4 459 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 USP12O75317 370 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 ADH1CP00326 375 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 ZNF18P17022 549 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 TYK2P29597 1187 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 SLC15A1P46059 708 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 POLGP54098 1239 aaPredicted RBP7.93□□□□□ -1.14
GPNMB-201ENST00000258733 HAND2P61296 217 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 PSMC5P62195 406 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 MORF4L2Q15014 288 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 KIZQ2M2Z5 673 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 ACSBG2Q5FVE4 666 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 DCAF17Q5H9S7 520 aaPredicted RBP7.93□□□□□ -1.14
GPNMB-201ENST00000258733 MPRIPQ6WCQ1 1025 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 COMTD1Q86VU5 262 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 CADM2Q8N3J6 435 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 TPCN2Q8NHX9 752 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 TCF25Q9BQ70 676 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 DNMT3LQ9UJW3 386 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 DMRT1Q9Y5R6 373 aa7.93□□□□□ -1.14
GPNMB-201ENST00000258733 ESYT2A0FGR8 921 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 F8W8V4 182 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 MSI1O43347 362 aaKnown RBP7.92□□□□□ -1.14
GPNMB-201ENST00000258733 DTNBO60941 627 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 PALMO75781 387 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 SLITRK5O94991 958 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 CDH1P12830 882 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 NAMPTP43490 491 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 STX17P56962 302 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 GPLD1P80108 840 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 CDK16Q00536 496 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 PTPN11Q06124 597 aaPredicted RBP7.92□□□□□ -1.14
GPNMB-201ENST00000258733 ZNF844Q08AG5 666 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 PEX6Q13608 980 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 PDK3Q15120 406 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 HECTD3Q5T447 861 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 GARNL3Q5VVW2 1013 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 PYHIN1Q6K0P9 492 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 CHADLQ6NUI6 762 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 ERICH5Q6P6B1 374 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 RHPN2Q8IUC4 686 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 TRIM22Q8IYM9 498 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 LRRC2Q9BYS8 371 aa7.92□□□□□ -1.14
GPNMB-201ENST00000258733 SPACA1Q9HBV2 294 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms