RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 C14orf80Q86SX3 495 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 DAAM2Q86T65 1068 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 CHSY1Q86X52 802 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 TMEM25Q86YD3 366 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 RHOT1Q8IXI2 618 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 CCAR2Q8N163 923 aaKnown RBP14.58□□□□□ -0.08
VPS25-201ENST00000253794 HJURPQ8NCD3 748 aaPredicted RBP14.58□□□□□ -0.08
VPS25-201ENST00000253794 TTC16Q8NEE8 873 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 KIAA1524Q8TCG1 905 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 P2RY11Q96G91 374 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 UHRF1Q96T88 793 aaPredicted RBP14.58□□□□□ -0.08
VPS25-201ENST00000253794 OR12D3Q9UGF7 316 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 PCSK1NQ9UHG2 260 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 FBXO10Q9UK96 956 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 NCOR1O75376 2440 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 TTC28Q96AY4 2481 aa14.58□□□□□ -0.08
VPS25-201ENST00000253794 MUC3AQ02505 3323 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 TCF20Q9UGU0 1960 aaKnown RBP14.57□□□□□ -0.08
VPS25-201ENST00000253794 A0A0C4DFX4 3053 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 TMEM110-MUSTN1A8MSY1 372 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 ZNF487B1APH4 448 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 E9PAM4 449 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 SPOPO43791 374 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 CACNG3O60359 315 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 PALMO75781 387 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 CYBBP04839 570 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 ADH5P11766 374 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 CTNNA2P26232 953 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 HOXD9P28356 352 aaPredicted RBP14.57□□□□□ -0.08
VPS25-201ENST00000253794 NAP1L1P55209 391 aaKnown RBP14.57□□□□□ -0.08
VPS25-201ENST00000253794 CA9Q16790 459 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 RABGAP1LQ5R372 815 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 RFWD3Q6PCD5 774 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 C1orf228Q6PIY5 440 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 LRRC31Q6UY01 552 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 CHST9Q7L1S5 443 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 NT5DC3Q86UY8 548 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 ETFBKMTQ8IXQ9 262 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 ZNF557Q8N988 423 aaPredicted RBP14.57□□□□□ -0.08
VPS25-201ENST00000253794 TRIM58Q8NG06 486 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 CSGALNACT1Q8TDX6 532 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 TSC1Q92574 1164 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 CHFRQ96EP1 664 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 TMA16Q96EY4 203 aaKnown RBP14.57□□□□□ -0.08
VPS25-201ENST00000253794 MYEOVQ96EZ4 313 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 EPAS1Q99814 870 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 SLC2A11Q9BYW1 496 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 SIK2Q9H0K1 926 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 GOLPH3Q9H4A6 298 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 C8orf33Q9H7E9 229 aaPredicted RBP14.57□□□□□ -0.08
VPS25-201ENST00000253794 LZTFL1Q9NQ48 299 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 GTSE1Q9NYZ3 720 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 RCOR3Q9P2K3 495 aaPredicted RBP14.57□□□□□ -0.08
VPS25-201ENST00000253794 WNT16Q9UBV4 365 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 ZNF212Q9UDV6 495 aa14.57□□□□□ -0.08
VPS25-201ENST00000253794 A0A1B0GVM2 712 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 CCDC66A2RUB6 948 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 TCAF2A6NFQ2 919 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 WASH4PA8MWX3 477 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 MIF4GDA9UHW6 222 aaKnown RBP14.56□□□□□ -0.08
VPS25-201ENST00000253794 FAM72CH0Y354 149 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 LRIG2O94898 1065 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 GJA4P35212 333 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 CTNNA1P35221 906 aaKnown RBP14.56□□□□□ -0.08
VPS25-201ENST00000253794 SGSHP51688 502 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 VCPP55072 806 aaKnown RBP14.56□□□□□ -0.08
VPS25-201ENST00000253794 AMPD2Q01433 879 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 PDK2Q15119 407 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 KCNT1Q5JUK3 1230 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 FAM72AQ5TYM5 149 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 FAM72DQ6L9T8 149 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 RALGPS2Q86X27 583 aaPredicted RBP14.56□□□□□ -0.08
VPS25-201ENST00000253794 FAM72BQ86X60 149 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 LGI2Q8N0V4 545 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 PYROXD2Q8N2H3 581 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 IGSF8Q969P0 613 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 NECAB3Q96P71 396 aaPredicted RBP14.56□□□□□ -0.08
VPS25-201ENST00000253794 KCTD15Q96SI1 283 aaPredicted RBP14.56□□□□□ -0.08
VPS25-201ENST00000253794 MAGEB5Q9BZ81 275 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.56□□□□□ -0.08
VPS25-201ENST00000253794 DDX56Q9NY93 547 aaKnown RBP14.56□□□□□ -0.08
VPS25-201ENST00000253794 VANGL2Q9ULK5 521 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 MYO10Q9HD67 2058 aa14.56□□□□□ -0.08
VPS25-201ENST00000253794 TYW5A2RUC4 315 aaKnown RBP14.55□□□□□ -0.08
VPS25-201ENST00000253794 SHISA7A6NL88 538 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 USP27XA6NNY8 438 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 FGF10O15520 208 aaPredicted RBP14.55□□□□□ -0.08
VPS25-201ENST00000253794 CLDN11O75508 207 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 SLC34A2O95436 690 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 TYRP14679 529 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 CDH4P55283 916 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 RPS24P62847 133 aaKnown RBP14.55□□□□□ -0.08
VPS25-201ENST00000253794 PRKCQQ04759 706 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 TAZQ16635 292 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 SMTNL2Q2TAL5 461 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 TPGS1Q6ZTW0 290 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 NLRP14Q86W24 1093 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 KATNAL2Q8IYT4 538 aa14.55□□□□□ -0.08
VPS25-201ENST00000253794 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.55□□□□□ -0.08
VPS25-201ENST00000253794 FAF2Q96CS3 445 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms