RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Tnk2O54967 1055 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Stx8O88983 236 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Serpina3kP07759 418 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 PrkcdP28867 674 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Slc19a1P41438 512 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tnks1bp1P58871 1720 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm7030Q0WXH6 285 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Secisbp2Q3U1C4 858 aaKnown RBP9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Parp8Q3UD82 852 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cdk10Q3UMM4 360 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Rapgefl1Q68EF8 662 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ube2j2Q6P073 259 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Herc4Q6PAV2 1057 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Scaf4Q6PFF0 1209 aaKnown RBP9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Arhgap26Q6ZQ82 814 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Olfr299Q7TS05 330 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Atp2c1Q80XR2 918 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Epb41l5Q8BGS1 731 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Hmbox1Q8BJA3 419 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gucy1b2Q8BXH3 824 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tns2Q8CGB6 1400 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 BicralQ8CHH5 1074 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Farp2Q91VS8 1065 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Vangl2Q91ZD4 521 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Sytl2Q99N50 950 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cmtm6Q9CZ69 183 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Bcas2Q9D287 225 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ccnl2Q9JJA7 518 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 C4bP01029 1738 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm29554A0A087WNW4 188 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ano3A2AHL1 981 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Zmynd12A2BGJ5 363 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 PtproE9Q612 1226 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Olfr237-ps1K9J725 310 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Slc22a8O88909 537 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Hoxa4P06798 285 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Dppa5bP85965 119 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 CtscP97821 462 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Q3TQQ9 903 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Nr1h4Q60641 488 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Abcb7Q61102 752 aaKnown RBP9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Trim24Q64127 1051 aaKnown RBP9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pram1Q6BCL1 675 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Rpl10Q6ZWV3 214 aaKnown RBP9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 AW551984Q8BGF0 804 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Olfm5Q8BU90 496 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Arhgef19Q8BWA8 802 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Snapc1Q8K0S9 389 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Vmn1r185Q8R299 319 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ak5Q920P5 562 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Sh3bp5lQ99LH9 392 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Fdx2Q9CPW2 174 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Bud23Q9CY21 281 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 S100pbpQ9D5K4 396 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cdkl2Q9QUK0 568 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Arid3bQ9Z1N7 568 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Dock5B2RY04 1868 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Nrxn3Q6P9K9 1571 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gbp11A9YVJ5 442 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ifnar2O35664 513 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Hoxd4P10628 250 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Acvr2bP27040 536 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Sstr1P30873 391 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tac1P41539 130 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Hspa4lP48722 838 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Setd4P58467 439 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Nploc4P60670 608 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Npas2P97460 816 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 PrlrQ08501 608 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Kbtbd8Q3UQV5 599 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Sult1d1Q3UZZ6 295 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pydc3Q3V3Q4 588 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cnpy1Q4VAB4 94 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Fstl1Q62356 306 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Krt73Q6NXH9 539 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Supt20hQ7TT00 530 aaKnown RBP9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Elmo2Q8BHL5 732 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Thap3Q8BJ25 218 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ugt2b1Q8R084 529 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ccdc137Q8R0K4 290 aaKnown RBP9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Oxnad1Q8VE38 311 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Lypd3Q91YK8 363 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Elmod3Q91YP6 381 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ripply3Q924S9 152 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Nme5Q99MH5 211 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ankrd61Q9CQM6 421 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ccdc103Q9D9P2 237 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Igdcc4Q9EQS9 1252 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Aldh1a3Q9JHW9 512 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Slfn2Q9Z0I6 378 aa9.97□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pkd2l1A2A259 760 aa9.96□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ppp1r36D3Z0R2 411 aa9.96□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 2610028H24RikG5E8K1 270 aa9.96□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Sgo2bJ3QMK1 1167 aa9.96□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Sema4dO09126 861 aa9.96□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ppargc1aO70343 797 aa9.96□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 IppP28575 584 aa9.96□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ap2s1P62743 142 aa9.96□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 SirpaP97797 513 aa9.96□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 EgfrQ01279 1210 aa9.96□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms