RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Vmn1r218Q8R261 298 aa10.68□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Ecrg4Q99LS0 148 aa10.68□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Bbs2Q9CWF6 721 aa10.68□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Nme9A0A1L1SUL6 329 aa10.68□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Cdr2lA2A6T1 465 aa10.68□□□□□ -0.7
Scn8a-201ENSMUST00000082209 NuggcD3YWJ0 796 aa10.68□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Srpk1O70551 648 aaKnown RBP10.68□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Znf112Q0VAW7 879 aa10.68□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Fam53cQ8BXQ8 393 aa10.68□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Fam49bQ921M7 324 aa10.68□□□□□ -0.7
Scn8a-201ENSMUST00000082209 4933425L06RikQ9D3Z8 585 aa10.68□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Bloc1s6Q9R0C0 172 aa10.68□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Gm8237E9Q257 205 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 LeprP48356 1162 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 DselQ0VBN2 1207 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Lpcat1Q3TFD2 534 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Trafd1Q3UDK1 580 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Slc2a13Q3UHK1 637 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Fdxacb1Q3UY23 622 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Usp49Q6P9L4 685 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Cops7bQ8BV13 264 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Wdr11Q8K1X1 1223 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Eva1bQ8K2Y3 164 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Chmp1b1Q99LU0 199 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Yaf2Q99LW6 179 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Rnft1Q9DCN7 395 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Copg2Q9QXK3 871 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Cacna1cQ01815 2139 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Pramef20B1ARV6 477 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Capza2P47754 286 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Slc16a10Q3U9N9 512 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Zfp512bQ6PHP4 879 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Ppp1r16aQ923M0 524 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Sept5Q9Z2Q6 369 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Atp9aO70228 1047 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Cap1P40124 474 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Pon1P52430 355 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Irf6P97431 467 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Pcnx4Q3UVY5 1174 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Zfp90Q61967 636 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Enpp4Q8BTJ4 456 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Acot13Q9CQR4 140 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Arel1Q8CHG5 823 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Snapc2Q91XA5 359 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Efcab1Q9D3N2 212 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Smpd3Q9JJY3 655 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Trim67Q505D9 768 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Cfap206Q6PE87 622 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Fam126bQ8C729 530 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Rtp1Q8C8C1 263 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Ccdc17Q8CE13 565 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Ssh3Q8K330 649 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Ube2sQ921J4 223 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Itgb6Q9Z0T9 787 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Kif28pD3YXS5 1028 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 AvilO88398 819 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Pou2f3P31362 431 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Tmcc2Q80W04 706 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Cdkn2aipQ8BI72 563 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Mical2Q8BML1 960 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 PolbQ8K409 335 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Cnga3Q9JJZ8 631 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Irx5Q9JKQ4 484 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Gm5478D3Z6R0 159 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 TpteG5E8H5 664 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Bace1P56818 501 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Usp39Q3TIX9 564 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Atp2c1Q80XR2 918 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 SvopQ8BFT9 548 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Kdm4bQ91VY5 1086 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Olfr600E9PUN7 314 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Brip1Q5SXJ3 1174 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Gstt1Q64471 240 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Tas2r109Q7M707 316 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Mfn1Q811U4 741 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Sh3glb2Q8R3V5 400 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Alg9Q8VDI9 611 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Ddit4Q9D3F7 229 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 PlekQ9JHK5 350 aaKnown RBP10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Ddx21Q9JIK5 851 aaKnown RBP10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 PolkQ9QUG2 852 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Cma1P21844 247 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Lrpap1P55302 360 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Ddr1Q03146 911 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Zdhhc3Q8R173 299 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Mgat5Q8R4G6 740 aa10.67□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Smok3aC0HKC8 504 aa10.66□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Smok3bC0HKC9 504 aa10.66□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Olfr292F8VQ84 308 aa10.66□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Gm20695H3BLK7 282 aa10.66□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Itgb3O54890 787 aa10.66□□□□□ -0.7
Scn8a-201ENSMUST00000082209 PigrO70570 771 aa10.66□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Atl1Q8BH66 558 aa10.66□□□□□ -0.7
Scn8a-201ENSMUST00000082209 NapepldQ8BH82 396 aa10.66□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Gpr180Q8BPS4 441 aa10.66□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Inpp4aQ9EPW0 939 aa10.66□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Gm5114W4VSN8 858 aa10.66□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Vmn2r74E9PW21 853 aa10.66□□□□□ -0.7
Scn8a-201ENSMUST00000082209 R3hcc1lQ8BJM3 775 aaKnown RBP10.66□□□□□ -0.7
Scn8a-201ENSMUST00000082209 Dctn2Q99KJ8 402 aa10.66□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms