RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Fbxw7Q8VBV4 629 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Fbxo21Q8VDH1 627 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Pcdhb17Q91VD8 799 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ddx50Q99MJ9 734 aaKnown RBP8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Raver1Q9CW46 748 aaKnown RBP8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Slc39a5Q9D856 535 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 TsaccQ9DA44 124 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tsc1Q9EP53 1161 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Htra2Q9JIY5 458 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Scube2Q9JJS0 997 aa8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gys1Q9Z1E4 738 aaKnown RBP8.98□□□□□ -0.97
Trim39-201ENSMUST00000042717 Plin4O88492 1403 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 SrgnP13609 152 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Hoxd8P23463 289 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Hspa9P38647 679 aaKnown RBP8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 GsrP47791 500 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 TubP50586 505 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Pon1P52430 355 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ephb3P54754 993 aaKnown RBP8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 CstaP56567 97 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Msx3P70354 204 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Mcm9Q2KHI9 1134 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Znf583Q3V080 568 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 H2-Q2Q4KN81 360 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Atl2Q6PA06 583 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Wnk4Q80UE6 1222 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Trim62Q80V85 475 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Dnali1Q8BVN8 258 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Q8CDN1 933 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Sik2Q8CFH6 931 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Atpaf2Q91YY4 289 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 LrgukQ9D5S7 820 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Atp11cQ9QZW0 1129 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Asb1Q9WV74 336 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Mbd1Q9Z2E2 636 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Znf106O88466 1888 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gm4924A0A1B0GR71 966 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gm8334F7CD45 553 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Capn6O35646 641 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Slc2a4P14142 509 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Vps45P97390 570 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Foxd4Q60688 444 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gpr19Q61121 415 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ccdc154Q6RUT8 657 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Proser3Q7TSA6 634 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Sdad1Q80UZ2 687 aaKnown RBP8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 CgasQ8C6L5 507 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 PvrQ8K094 408 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Agap3Q8VHH5 910 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Usp3Q91W36 520 aaKnown RBP8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Isl2Q9CXV0 359 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Satl1Q9D5N8 744 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tlr9Q9EQU3 1032 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Akr1a1Q9JII6 325 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 AatfQ9JKX4 526 aaKnown RBP8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Drg2Q9QXB9 364 aaKnown RBP8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Nme3Q9WV85 169 aa8.97□□□□□ -0.97
Trim39-201ENSMUST00000042717 Igkv5-43A0A0B4J1J2 115 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Vmn2r72D3Z4N8 856 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Fam124aD3Z5V4 536 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 4930426L09RikE9Q0N7 123 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Kcng2F7A6P6 480 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Akain1G3UWD5 69 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Pdk4O70571 412 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Usp2O88623 613 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 PrnpP04925 254 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Slc6a13P31649 602 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 PolgP54099 1218 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Pms2P54279 859 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Adcyap1r1P70205 496 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Uba1Q02053 1058 aaKnown RBP8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Faf2Q3TDN2 445 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Rnf40Q3U319 1001 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Rrp36Q3UFY0 244 aaKnown RBP8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Ceacam5Q3UKK2 947 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Gcnt3Q5JCT0 437 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Dmc1Q61880 340 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Rxfp1Q6R6I7 758 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tdpoz3Q717B4 365 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Prdm4Q80V63 803 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Q810S2 196 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Hspbap1Q8BK58 483 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Spdye4bQ8CDE8 236 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Tssk3Q9D2E1 268 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Malrd1A2AJX4 2123 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Cdh23Q99PF4 3354 aa8.96□□□□□ -0.97
Trim39-201ENSMUST00000042717 Fam171a2A2A699 822 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Zfp472B0V2W5 534 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Zscan5bB2RTN3 468 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Vmn2r27D3YUK6 857 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ppp1r36D3Z0R2 411 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 4930558K02RikE0CXC6 182 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ncf2O70145 525 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Gas2P11862 314 aaKnown RBP8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Resp18P47939 175 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 RelaQ04207 549 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 InscQ3HNM7 579 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Ica1lQ3TY65 431 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Olfml2bQ3V1G4 746 aa8.96□□□□□ -0.98
Trim39-201ENSMUST00000042717 Birc2Q62210 612 aa8.96□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms