RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 HACE1Q8IYU2 909 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 KIF2BQ8N4N8 673 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 GSDMBQ8TAX9 411 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 EDEM1Q92611 657 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 TTC17Q96AE7 1141 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 NPHS2Q9NP85 383 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 SLC17A6Q9P2U8 582 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 CHKBQ9Y259 395 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 SNX10Q9Y5X0 201 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 DCLK1O15075 740 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 PSMB4P28070 264 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 ADRA1BP35368 520 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 BRCC3P46736 316 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 WASHC5Q12768 1159 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 SMAD1Q15797 465 aaKnown RBP17.49■□□□□ 0.39
PHGDH-229ENST00000641891 BHLHA9Q7RTU4 235 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 PARP9Q8IXQ6 854 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 GBP7Q8N8V2 638 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-229ENST00000641891 MYLPFQ96A32 169 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 XAB2Q9HCS7 855 aaKnown RBP17.49■□□□□ 0.39
PHGDH-229ENST00000641891 CHST12Q9NRB3 414 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 CDH9Q9ULB4 789 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 PADI3Q9ULW8 664 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 GIT1Q9Y2X7 761 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 PCDHA11Q9Y5I1 949 aa17.49■□□□□ 0.39
PHGDH-229ENST00000641891 CEP350Q5VT06 3117 aa17.48■□□□□ 0.39
PHGDH-229ENST00000641891 FAM159BA6NKW6 160 aa17.48■□□□□ 0.39
PHGDH-229ENST00000641891 FBXO21O94952 628 aa17.48■□□□□ 0.39
PHGDH-229ENST00000641891 SNRPAP09012 282 aaKnown RBP17.48■□□□□ 0.39
PHGDH-229ENST00000641891 DHRS4L1P0CG22 281 aa17.48■□□□□ 0.39
PHGDH-229ENST00000641891 SESN2P58004 480 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-229ENST00000641891 OLIG2Q13516 323 aa17.48■□□□□ 0.39
PHGDH-229ENST00000641891 PAFAH1B3Q15102 231 aaKnown RBP17.48■□□□□ 0.39
PHGDH-229ENST00000641891 RAB41Q5JT25 222 aa17.48■□□□□ 0.39
PHGDH-229ENST00000641891 BSPRYQ5W0U4 402 aa17.48■□□□□ 0.39
PHGDH-229ENST00000641891 ZNF567Q8N184 647 aa17.48■□□□□ 0.39
PHGDH-229ENST00000641891 ERP27Q96DN0 273 aa17.48■□□□□ 0.39
PHGDH-229ENST00000641891 UPF3AQ9H1J1 476 aaKnown RBP17.48■□□□□ 0.39
PHGDH-229ENST00000641891 MANSC1Q9H8J5 431 aa17.48■□□□□ 0.39
PHGDH-229ENST00000641891 DDIT4Q9NX09 232 aa17.48■□□□□ 0.39
PHGDH-229ENST00000641891 ZNF180Q9UJW8 692 aa17.48■□□□□ 0.39
PHGDH-229ENST00000641891 USH1CQ9Y6N9 552 aa17.48■□□□□ 0.39
PHGDH-229ENST00000641891 HMX2A2RU54 273 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 FAM155AB1AL88 458 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-229ENST00000641891 KCNK1O00180 336 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 LTFP02788 710 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 ERCC2P18074 760 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 FDFT1P37268 417 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 GLUD2P49448 558 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 MFSD14CQ5VZR4 134 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 CASC4Q6P4E1 433 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 BZW1Q7L1Q6 419 aaKnown RBP17.47■□□□□ 0.39
PHGDH-229ENST00000641891 RFWD2Q8NHY2 731 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 STAMBPL1Q96FJ0 436 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 OXNAD1Q96HP4 312 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-229ENST00000641891 PGLYRP2Q96PD5 576 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 SRPK1Q96SB4 655 aaKnown RBP17.47■□□□□ 0.39
PHGDH-229ENST00000641891 TMEM209Q96SK2 561 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 VPS11Q9H270 941 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 CNGB3Q9NQW8 809 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 BRCA2P51587 3418 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 COPEO14579 308 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 GPR182O15218 404 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 RFPL1O75677 317 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 CAPN15O75808 1086 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 KRT37O76014 449 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 BGNP21810 368 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 MGAT1P26572 445 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 FLT3LGP49771 235 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 CCDC15Q0P6D6 951 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 PDK1Q15118 436 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 PLEKHG4Q58EX7 1191 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 NPWQ8N729 165 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 DEPDC1BQ8WUY9 529 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 SMARCD1Q96GM5 515 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 CD248Q9HCU0 757 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 TMLHEQ9NVH6 421 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 INPP5FQ9Y2H2 1132 aa17.47■□□□□ 0.39
PHGDH-229ENST00000641891 F8W810 466 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 OPHN1O60890 802 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 B3GAT3O94766 335 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 ASGR1P07306 291 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 GSTA2P09210 222 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 NQO1P15559 274 aaKnown RBP17.46■□□□□ 0.39
PHGDH-229ENST00000641891 SEMA3BQ13214 749 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 MROH9Q5TGP6 573 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 MRPL10Q7Z7H8 261 aaKnown RBP17.46■□□□□ 0.39
PHGDH-229ENST00000641891 SUGP1Q8IWZ8 645 aaKnown RBP17.46■□□□□ 0.39
PHGDH-229ENST00000641891 SLC13A1Q9BZW2 595 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 KANSL3Q9P2N6 904 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 DCTN4Q9UJW0 460 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 FBXW11Q9UKB1 542 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 PTCH2Q9Y6C5 1203 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 MYO18AQ92614 2054 aaKnown RBP17.46■□□□□ 0.39
PHGDH-229ENST00000641891 SF3B1O75533 1304 aaKnown RBP eCLIP17.46■□□□□ 0.393e-6■■■■■ 100.2
PHGDH-229ENST00000641891 CFAP73A6NFT4 308 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 C9IYK1 514 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 PPP1R12AO14974 1030 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-229ENST00000641891 MGRN1O60291 552 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 ADAMTS4O75173 837 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms