RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 NMUR1Q9HB89 426 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 RC3H2Q9HBD1 1191 aaKnown RBP9.16□□□□□ -0.94
PHGDH-219ENST00000641513 CYP4F11Q9HBI6 524 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 TLR8Q9NR97 1041 aaKnown RBP9.16□□□□□ -0.94
PHGDH-219ENST00000641513 MRPL17Q9NRX2 175 aaKnown RBP9.16□□□□□ -0.94
PHGDH-219ENST00000641513 ANAPC5Q9UJX4 755 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 FBXW11Q9UKB1 542 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 ZMYND8Q9ULU4 1186 aaPredicted RBP9.16□□□□□ -0.94
PHGDH-219ENST00000641513 SNX10Q9Y5X0 201 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 SLC4A7Q9Y6M7 1214 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 COL4A4P53420 1690 aaPredicted RBP9.16□□□□□ -0.94
PHGDH-219ENST00000641513 MIA3Q5JRA6 1907 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 ZNF487B1APH4 448 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 MSI1O43347 362 aaKnown RBP9.15□□□□□ -0.94
PHGDH-219ENST00000641513 TLL1O43897 1013 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 FGF18O76093 207 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 GJB5O95377 273 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 VNN2O95498 520 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 MOCS2O96007 188 aaPredicted RBP9.15□□□□□ -0.94
PHGDH-219ENST00000641513 ZSCAN5DPP0CG00 497 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 IL4RP24394 825 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 ATP5DP30049 168 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 ALDH1A3P47895 512 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 CCT5P48643 541 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 CXCR3P49682 368 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 PGFP49763 221 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 ITGA8P53708 1063 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 IFFO1Q0D2I5 559 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 EFEMP1Q12805 493 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 GPS1Q13098 491 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 OASLQ15646 514 aaKnown RBP9.15□□□□□ -0.94
PHGDH-219ENST00000641513 P3H1Q32P28 736 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 KRT71Q3SY84 523 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 C10orf120Q5SQS8 335 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 TMEM240Q5SV17 173 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 SLC8B1Q6J4K2 584 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 FOXR1Q6PIV2 292 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 RHBDF2Q6PJF5 856 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 BEND5Q7L4P6 421 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 BNIPLQ7Z465 357 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 UBE2Q1Q7Z7E8 422 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 TADA2BQ86TJ2 420 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 NLRP14Q86W24 1093 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 VSIG1Q86XK7 387 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 CDKL3Q8IVW4 592 aaPredicted RBP9.15□□□□□ -0.94
PHGDH-219ENST00000641513 UNC45BQ8IWX7 931 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 RNF168Q8IYW5 571 aaPredicted RBP9.15□□□□□ -0.94
PHGDH-219ENST00000641513 TAB3Q8N5C8 712 aaPredicted RBP9.15□□□□□ -0.94
PHGDH-219ENST00000641513 SH2D3CQ8N5H7 860 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 CCDC33Q8N5R6 958 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 FAM71DQ8N9W8 422 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 FBXO25Q8TCJ0 367 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 CASP10Q92851 521 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 NKD2Q969F2 451 aaPredicted RBP9.15□□□□□ -0.94
PHGDH-219ENST00000641513 NTAN1Q96AB6 310 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 FAF2Q96CS3 445 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 SPATA17Q96L03 361 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 SERPINB11Q96P15 392 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 EPAS1Q99814 870 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 CLSTN3Q9BQT9 956 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 PHACTR1Q9C0D0 580 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 NACA2Q9H009 215 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 SIK2Q9H0K1 926 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 MTIF3Q9H2K0 278 aaKnown RBP9.15□□□□□ -0.94
PHGDH-219ENST00000641513 SMOC2Q9H3U7 446 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 PPCSQ9HAB8 311 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 WDR6Q9NNW5 1121 aaKnown RBP9.15□□□□□ -0.94
PHGDH-219ENST00000641513 COMMD8Q9NX08 183 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 MTMR10Q9NXD2 777 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 CXXC1Q9P0U4 656 aaPredicted RBP9.15□□□□□ -0.94
PHGDH-219ENST00000641513 RCOR3Q9P2K3 495 aaPredicted RBP9.15□□□□□ -0.94
PHGDH-219ENST00000641513 AFF4Q9UHB7 1163 aaKnown RBP9.15□□□□□ -0.94
PHGDH-219ENST00000641513 INSL6Q9Y581 213 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 FAM169AQ9Y6X4 670 aa9.15□□□□□ -0.94
PHGDH-219ENST00000641513 NYNRINQ9P2P1 1898 aaKnown RBP9.15□□□□□ -0.95
PHGDH-219ENST00000641513 HELZP42694 1942 aaKnown RBP9.14□□□□□ -0.95
PHGDH-219ENST00000641513 GMNCA6NCL1 334 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 KCNN4O15554 427 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 IRAK2O43187 625 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 KIAA0754O94854 1291 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 FSBPO95073 299 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 SEC24AO95486 1093 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 EFEMP2O95967 443 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 HMBSP08397 361 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 SRGAP2BP0DMP2 458 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 ATF6P18850 670 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 CCR1P32246 355 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 CTNNB1P35222 781 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 MMP13P45452 471 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 PSEN1P49768 467 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 TBX4P57082 545 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 GBE1Q04446 702 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 SCAPQ12770 1279 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 VEPH1Q14D04 833 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 BRMS1LQ5PSV4 323 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 RASIP1Q5U651 963 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 TPGS2Q68CL5 300 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 KCTD16Q68DU8 428 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 NCBP2-AS2Q69YL0 99 aa9.14□□□□□ -0.95
PHGDH-219ENST00000641513 SLC9A4Q6AI14 798 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms