RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 FNDC5Q8NAU1 212 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 POMKQ9H5K3 350 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 FAM237BA0A1B0GVD1 139 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 CCNT2O60583 730 aaKnown RBP18.91■□□□□ 0.62
SCARB2-213ENST00000638680 SLITRK3O94933 977 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 CRABP2P29373 138 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 HALP42357 657 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 PTDSS1P48651 473 aaKnown RBP18.91■□□□□ 0.62
SCARB2-213ENST00000638680 GCNT1Q02742 428 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 C1DQ13901 141 aaKnown RBP18.91■□□□□ 0.62
SCARB2-213ENST00000638680 DPYSL3Q14195 570 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 NRF1Q16656 503 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 C16orf46Q6P387 395 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 CYP2W1Q8TAV3 490 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 TRPC4APQ8TEL6 797 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 RBM22Q9NW64 420 aaKnown RBP eCLIP18.91■□□□□ 0.62
SCARB2-213ENST00000638680 ETS1P14921 441 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 TAF1CQ15572 869 aaPredicted RBP18.91■□□□□ 0.62
SCARB2-213ENST00000638680 INAQ16352 499 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 TRIM71Q2Q1W2 868 aaKnown RBP18.91■□□□□ 0.62
SCARB2-213ENST00000638680 RNF43Q68DV7 783 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 TYW3Q6IPR3 259 aaKnown RBP18.91■□□□□ 0.62
SCARB2-213ENST00000638680 NECAB2Q7Z6G3 386 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 RORBQ92753 470 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 C9orf16Q9BUW7 83 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 TAS2R14Q9NYV8 317 aa18.91■□□□□ 0.62
SCARB2-213ENST00000638680 ITGALP20701 1170 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 EFEMP1Q12805 493 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 SH3RF1Q7Z6J0 888 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 C10orf53Q8N6V4 93 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 PARK7Q99497 189 aaKnown RBP18.9■□□□□ 0.62
SCARB2-213ENST00000638680 AVENQ9NQS1 362 aaPredicted RBP18.9■□□□□ 0.62
SCARB2-213ENST00000638680 KLHL20Q9Y2M5 609 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 PTGES3LE9PB15 166 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 H0YC42 278 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 GSTT1P30711 240 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 CPT1AP50416 773 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 DMPKQ09013 629 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 LAMTOR4Q0VGL1 99 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 B3GNT6Q6ZMB0 384 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 ILDR2Q71H61 639 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 CARNMT1Q8N4J0 409 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 DHRSXQ8N5I4 330 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 FLCNQ8NFG4 579 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 LIMD1Q9UGP4 676 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 ADAM30Q9UKF2 790 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.9■□□□□ 0.62
SCARB2-213ENST00000638680 CEP170BQ9Y4F5 1589 aaPredicted RBP18.9■□□□□ 0.62
SCARB2-213ENST00000638680 ANXA11P50995 505 aaKnown RBP18.9■□□□□ 0.62
SCARB2-213ENST00000638680 CHN2P52757 468 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 NDST1P52848 882 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 NET1Q7Z628 596 aaPredicted RBP18.9■□□□□ 0.62
SCARB2-213ENST00000638680 APBA2Q99767 749 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 DIABLOQ9NR28 239 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 CAMSAP1Q5T5Y3 1602 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 FAM86B1E9PN63 330 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 RFX3P48380 749 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 SLC12A3P55017 1021 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 KYAT3Q6YP21 454 aaKnown RBP18.9■□□□□ 0.62
SCARB2-213ENST00000638680 KRT78Q8N1N4 520 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 RIBC2Q9H4K1 309 aa18.9■□□□□ 0.62
SCARB2-213ENST00000638680 ZC3H13Q5T200 1668 aaKnown RBP18.9■□□□□ 0.62
SCARB2-213ENST00000638680 LRRC10BA6NIK2 292 aa18.89■□□□□ 0.62
SCARB2-213ENST00000638680 C2CD2LO14523 706 aa18.89■□□□□ 0.62
SCARB2-213ENST00000638680 PBLDP30039 288 aaPredicted RBP18.89■□□□□ 0.62
SCARB2-213ENST00000638680 DGUOKQ16854 277 aa18.89■□□□□ 0.62
SCARB2-213ENST00000638680 CCDC149Q6ZUS6 474 aa18.89■□□□□ 0.62
SCARB2-213ENST00000638680 KATNAL2Q8IYT4 538 aa18.89■□□□□ 0.62
SCARB2-213ENST00000638680 HDHD2Q9H0R4 259 aa18.89■□□□□ 0.62
SCARB2-213ENST00000638680 ACTR8Q9H981 624 aa18.89■□□□□ 0.62
SCARB2-213ENST00000638680 PARVBQ9HBI1 364 aa18.89■□□□□ 0.62
SCARB2-213ENST00000638680 BARX2Q9UMQ3 279 aaPredicted RBP18.89■□□□□ 0.62
SCARB2-213ENST00000638680 C1orf167Q5SNV9 1468 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 A0A087WXM4 84 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 TPP1O14773 563 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 DGKKQ5KSL6 1271 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 FAM117BQ6P1L5 589 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 FBXO39Q8N4B4 442 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 GJD4Q96KN9 370 aaPredicted RBP18.89■□□□□ 0.61
SCARB2-213ENST00000638680 TBCBQ99426 244 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 COQ7Q99807 217 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 CEP44Q9C0F1 390 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 NMRAL1Q9HBL8 299 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 DMAP1Q9NPF5 467 aaPredicted RBP18.89■□□□□ 0.61
SCARB2-213ENST00000638680 TRDMT1O14717 391 aaKnown RBP18.89■□□□□ 0.61
SCARB2-213ENST00000638680 MED26O95402 600 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 ALOX12P18054 663 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 CDK7P50613 346 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 XPNPEP3Q9NQH7 507 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 PADI4Q9UM07 663 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 SPTLC1O15269 473 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 TALDO1P37837 337 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 NPY2RP49146 381 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 SLC25A3Q00325 362 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 SAMD4BQ5PRF9 694 aaKnown RBP18.89■□□□□ 0.61
SCARB2-213ENST00000638680 TMC7Q7Z402 723 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 STK39Q9UEW8 545 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 POLLQ9UGP5 575 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 ZNF470Q6ECI4 717 aa18.89■□□□□ 0.61
SCARB2-213ENST00000638680 ZNF513Q8N8E2 541 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms