RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 GPN3Q9UHW5 284 aaPredicted RBP19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 HAO1Q9UJM8 370 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 CHKBQ9Y259 395 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 LRRC69Q6ZNQ3 347 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 NECAB2Q7Z6G3 386 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 DDX18Q9NVP1 670 aaKnown RBP19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 C3orf18Q9UK00 162 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 TMEM5Q9Y2B1 443 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 RBP3P10745 1247 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 CLVS1Q8IUQ0 354 aaPredicted RBP19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 DEFB107AQ8IZN7 70 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 RHOBTB2Q9BYZ6 727 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 LRRC40Q9H9A6 602 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 CLEC4AQ9UMR7 237 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 ANKARQ7Z5J8 1434 aa19.77■□□□□ 0.76
CACNA1A-257ENST00000638009 RPL9P32969 192 aaKnown RBP19.77■□□□□ 0.75
CACNA1A-257ENST00000638009 FMO5P49326 533 aa19.77■□□□□ 0.75
CACNA1A-257ENST00000638009 GEMP55040 296 aa19.77■□□□□ 0.75
CACNA1A-257ENST00000638009 PKP1Q13835 747 aa19.77■□□□□ 0.75
CACNA1A-257ENST00000638009 GMIPQ9P107 970 aa19.77■□□□□ 0.75
CACNA1A-257ENST00000638009 SNAP23O00161 211 aa19.77■□□□□ 0.75
CACNA1A-257ENST00000638009 TCHHL1Q5QJ38 904 aaPredicted RBP19.77■□□□□ 0.75
CACNA1A-257ENST00000638009 ITFG1Q8TB96 612 aa19.77■□□□□ 0.75
CACNA1A-257ENST00000638009 BBS4Q96RK4 519 aa19.77■□□□□ 0.75
CACNA1A-257ENST00000638009 PRDM5Q9NQX1 630 aaPredicted RBP19.77■□□□□ 0.75
CACNA1A-257ENST00000638009 ZSWIM5Q9P217 1185 aa19.77■□□□□ 0.75
CACNA1A-257ENST00000638009 SHOC2Q9UQ13 582 aa19.77■□□□□ 0.75
CACNA1A-257ENST00000638009 QRICH2Q9H0J4 1663 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 A0A0G2JPF8 293 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 HNRNPCL3B7ZW38 293 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 SGTAO43765 313 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 HNRNPCL4P0DMR1 293 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 NR4A1P22736 598 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 CRABP2P29373 138 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 OXCT1P55809 520 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 SLC24A2Q9UI40 661 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 GNPTGQ9UJJ9 305 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 UMPSP11172 480 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 ITGA8P53708 1063 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 NUDT12Q9BQG2 462 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 GPAMQ9HCL2 828 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 AKAP8O43823 692 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 DGAT1O75907 488 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 FOSL1P15407 271 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 NR2C2P49116 596 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 JAMLQ86YT9 394 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 GPD1P21695 349 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 DLG4P78352 724 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 BMT2Q1RMZ1 405 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 KBTBD7Q8WVZ9 684 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 GRB14Q14449 540 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 ZBTB6Q15916 424 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 PDPK2PQ6A1A2 396 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 FAM111AQ96PZ2 611 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 INTS7Q9NVH2 962 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 NUP50Q9UKX7 468 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 UBA1P22314 1058 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 EIF5AL1Q6IS14 154 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 SH2D3CQ8N5H7 860 aa19.76■□□□□ 0.75
CACNA1A-257ENST00000638009 PTPN3P26045 913 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 CDK8P49336 464 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 MS4A14Q96JA4 679 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 CCNB1IP1Q9NPC3 277 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 SORCS3Q9UPU3 1222 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 PCDHA10Q9Y5I2 948 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 TCEA3O75764 348 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 SLC16A2P36021 539 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 ARFIP1P53367 373 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 PDIA5Q14554 519 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 ATG14Q6ZNE5 492 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 GDPD5Q8WTR4 605 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 ERMAPQ96PL5 475 aaPredicted RBP19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 SFI1A8K8P3 1242 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 ZNHIT3Q15649 155 aaPredicted RBP19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 TDRD10Q5VZ19 366 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 TXNDC11Q6PKC3 985 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 MMP19Q99542 508 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 PUS7LQ9H0K6 701 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 ZCCHC17Q9NP64 241 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 SAR1AQ9NR31 198 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 PLCL2Q9UPR0 1127 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 PCDHGB3Q9Y5G1 929 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 SHROOM3Q8TF72 1996 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 HSD3B1P14060 373 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 RIPK1Q13546 671 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 OTUD3Q5T2D3 398 aaPredicted RBP19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 FAM92BQ6ZTR7 304 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 C17orf50Q8WW18 174 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 FIG4Q92562 907 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 SHANK2Q9UPX8 1470 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 PLOD2O00469 737 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 CDK7P50613 346 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 ZNF177Q13360 481 aaPredicted RBP19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 SKIV2LQ15477 1246 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 KCNB2Q92953 911 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 EAF2Q96CJ1 260 aaPredicted RBP19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 MED8Q96G25 268 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 TMEM8AQ9HCN3 771 aa19.75■□□□□ 0.75
CACNA1A-257ENST00000638009 BARHL2Q9NY43 387 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms