RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ROPN1BQ9BZX4 212 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 SLC39A8Q9C0K1 460 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 ROPN1Q9HAT0 212 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 LY9Q9HBG7 655 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 CYLDQ9NQC7 956 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 RRAGDQ9NQL2 400 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 MANSC4A6NHS7 340 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 AGRPO00253 132 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 CD3EAPO15446 510 aaKnown RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 PSTPIP1O43586 416 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 ENTPD3O75355 529 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 TDP2O95551 362 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 TYMPP19971 482 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 HNRNPH1P31943 449 aaKnown RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 BOP1Q14137 746 aaKnown RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 E2F4Q16254 413 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 AKIRIN2Q53H80 203 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 TFDP3Q5H9I0 405 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 SCARA3Q6AZY7 606 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 STYK1Q6J9G0 422 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 PAGE2Q7Z2X7 111 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 ZFP28Q8NHY6 868 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 SOCS4Q8WXH5 440 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 COQ7Q99807 217 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 BDH2Q9BUT1 245 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 FAIM2Q9BWQ8 316 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 SLC27A6Q9Y2P4 619 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 ZBTB12Q9Y330 459 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 NCK2O43639 380 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 ITGA3P26006 1051 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 UGT1A5P35504 534 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 TUFMP49411 452 aaKnown RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 CTCFP49711 727 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 BCAP31P51572 246 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 RESTQ13127 1097 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 KYNUQ16719 465 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 MFSD7Q6UXD7 560 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 SLC13A5Q86YT5 568 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 CENPIQ92674 756 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 TRIM51Q9BSJ1 452 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 C1QTNF1Q9BXJ1 281 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 FKBP14Q9NWM8 211 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 RRN3Q9NYV6 651 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 ZNHIT2Q9UHR6 403 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 RPTORQ8N122 1335 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 CCDC154A6NI56 674 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 STX16-NPEPL1H3BU86 382 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 IGF2BP3O00425 579 aaKnown RBP eCLIP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 STX16O14662 325 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 ATP5F1P24539 256 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 IL5RAQ01344 420 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 GRB14Q14449 540 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 HLFQ16534 295 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 MTA3Q9BTC8 594 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 CPVLQ9H3G5 476 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 KLC4Q9NSK0 619 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 TRIM17Q9Y577 477 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 CPSF1Q10570 1443 aaKnown RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 KPNA5O15131 536 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 INPP4BO15327 924 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 RGS14O43566 566 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 MED26O95402 600 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 GMPSP49915 693 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 ITGA8P53708 1063 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 TBX4P57082 545 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 ACTR3P61158 418 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 LGALS3BPQ08380 585 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 ABRQ12979 859 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 SLC18A3Q16572 532 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 DDI2Q5TDH0 399 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 MYCBPAPQ8TBZ2 947 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 PHF20Q9BVI0 1012 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 VCPKMTQ9H867 229 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 GBA2Q9HCG7 927 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 FANCFQ9NPI8 374 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 MRPL17Q9NRX2 175 aaKnown RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 UBAP1Q9NZ09 502 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 NCKIPSDQ9NZQ3 722 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 FAM153AQ9UHL3 310 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 SLC12A4Q9UP95 1085 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 TPD52L2O43399 206 aaKnown RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 EPN2O95208 641 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CHN1P15882 459 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 SLC26A2P50443 739 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 RAB25P57735 213 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 GLRA4Q5JXX5 417 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 OLFML2AQ68BL7 652 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CDH24Q86UP0 819 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 AIFM3Q96NN9 605 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 DEFB129Q9H1M3 183 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 ATAD3AQ9NVI7 634 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 DNPEPQ9ULA0 475 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 AP3M1Q9Y2T2 418 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 MROH7Q68CQ1 1323 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 ZNF208O43345 1280 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 RAMP2O60895 175 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 VDRP11473 427 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 RPA3P35244 121 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 NDUFV1P49821 464 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms