RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 MDH1BQ5I0G3 518 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 NSMFQ6X4W1 530 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 CYP4V2Q6ZWL3 525 aaPredicted RBP10.67□□□□□ -0.7
VPS11-207ENST00000620429 IGFN1Q86VF2 1251 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 LDHDQ86WU2 507 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 ARHGEF19Q8IW93 802 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 CCDC33Q8N5R6 958 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 NLRP7Q8WX94 980 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 ERLEC1Q96DZ1 483 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 C8orf48Q96LL4 319 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 PCDHB18PQ96TA0 734 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 SMYD3Q9H7B4 428 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 AGPAT3Q9NRZ7 376 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 MRGBPQ9NV56 204 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 FETUBQ9UGM5 382 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 APOBEC2Q9Y235 224 aaKnown RBP10.67□□□□□ -0.7
VPS11-207ENST00000620429 AP4S1Q9Y587 144 aa10.67□□□□□ -0.7
VPS11-207ENST00000620429 PRR5-ARHGAP8B1AHC4 643 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 H3BMQ9 156 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 MSH4O15457 936 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 GMNNO75496 209 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 PLS3P13797 630 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 NAGAP17050 411 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 DDX5P17844 614 aaKnown RBP10.66□□□□□ -0.7
VPS11-207ENST00000620429 ACAT1P24752 427 aaKnown RBP10.66□□□□□ -0.7
VPS11-207ENST00000620429 ARHGAP8P85298 464 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 SLC25A3Q00325 362 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 AP3B2Q13367 1082 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 NFIL3Q16649 462 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 PLEKHA7Q6IQ23 1121 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 SETD3Q86TU7 594 aaPredicted RBP10.66□□□□□ -0.7
VPS11-207ENST00000620429 TPH2Q8IWU9 490 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 FAM178BQ8IXR5 827 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 BANPQ8N9N5 519 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 CAPSLQ8WWF8 208 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 ATG4AQ8WYN0 398 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 PEX13Q92968 403 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 LENG9Q96B70 501 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 FAM20AQ96MK3 541 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 COG8Q96MW5 612 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 MRIQ9BWK5 157 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 TP63Q9H3D4 680 aaPredicted RBP10.66□□□□□ -0.7
VPS11-207ENST00000620429 ZNF277Q9NRM2 450 aaPredicted RBP10.66□□□□□ -0.7
VPS11-207ENST00000620429 RIMS3Q9UJD0 308 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 AGO2Q9UKV8 859 aaKnown RBP10.66□□□□□ -0.7
VPS11-207ENST00000620429 IKBKGQ9Y6K9 419 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 CNTNAP1P78357 1384 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 GOLGA8QA0A0J9YX86 632 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 FAM172BPA6NC97 362 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 GOLGA8OA6NCC3 632 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 ZSCAN5BA6NJL1 495 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 A6NL46 340 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 GOLGA8NF8WBI6 632 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 GOLGA8RI6L899 631 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 AP3B1O00203 1094 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 FSCN2O14926 492 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 ZBTB39O15060 712 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 KLHL41O60662 606 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 SGPL1O95470 568 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 RFX1P22670 979 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 HOXA13P31271 388 aaPredicted RBP10.66□□□□□ -0.7
VPS11-207ENST00000620429 ZNF76P36508 570 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 BMPR1AP36894 532 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 ADCY8P40145 1251 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 TPTEP56180 551 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 FKBP1AP62942 108 aaKnown RBP10.66□□□□□ -0.7
VPS11-207ENST00000620429 CYP4F22Q6NT55 531 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 TMEM179Q6ZVK1 233 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 HACE1Q8IYU2 909 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 ZCCHC9Q8N567 271 aaKnown RBP10.66□□□□□ -0.7
VPS11-207ENST00000620429 LMO3Q8TAP4 145 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 CYP2W1Q8TAV3 490 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 ACER1Q8TDN7 264 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 DCAF4Q8WV16 495 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 SDCCAG3Q96C92 435 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 C17orf80Q9BSJ5 609 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 CHST7Q9NS84 486 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 PNPLA3Q9NST1 481 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 DMAC2Q9NW81 257 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 DSEQ9UL01 958 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 CDC14AQ9UNH5 594 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 SLC8A2Q9UPR5 921 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 PPME1Q9Y570 386 aa10.66□□□□□ -0.7
VPS11-207ENST00000620429 MEI4A8MW99 385 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 MSI1O43347 362 aaKnown RBP10.65□□□□□ -0.7
VPS11-207ENST00000620429 CD247P20963 164 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 RRM1P23921 792 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 EPHB1P54762 984 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 GNG2P59768 71 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 C19orf57Q0VDD7 668 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 BNIP3Q12983 259 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 CCDC142Q17RM4 750 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 TUBA3EQ6PEY2 450 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 STXBP4Q6ZWJ1 553 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 ZNF720Q7Z2F6 126 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 CPNE9Q8IYJ1 553 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 CRYGNQ8WXF5 182 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 ZNF304Q9HCX3 659 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 ACP6Q9NPH0 428 aa10.65□□□□□ -0.7
VPS11-207ENST00000620429 DDX56Q9NY93 547 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms