RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 USP13Q92995 863 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 TRIM8Q9BZR9 551 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CEP44Q9C0F1 390 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TMEM39BQ9GZU3 492 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 PXMP2Q9NR77 195 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ARHGEF38Q9NXL2 777 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TUBA8Q9NY65 449 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 KANSL3Q9P2N6 904 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 NKX1-2Q9UD57 310 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 RABGEF1Q9UJ41 708 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TDRKHQ9Y2W6 561 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 CHADO15335 359 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 AP1G2O75843 785 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 UNC5CO95185 931 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TFEBP19484 476 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 DNAJB2P25686 324 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 MIPP30301 263 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RPA3P35244 121 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 PPP3CCP48454 512 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 Q3C1V9 767 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ADGRA1Q86SQ6 560 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 SLC9A9Q8IVB4 645 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ARHGEF19Q8IW93 802 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ALLCQ8N6M5 410 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 EXT2Q93063 718 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TADA1Q96BN2 335 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 PDGFDQ9GZP0 370 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 KCTD10Q9H3F6 313 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RMI1Q9H9A7 625 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TRPC7Q9HCX4 862 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ENTPD7Q9NQZ7 604 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 DDX28Q9NUL7 540 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 COMMD8Q9NX08 183 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CYP39A1Q9NYL5 469 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TMX2Q9Y320 296 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 SPTBN2O15020 2390 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 C5orf58C9J3I9 102 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TRAFD1O14545 582 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 HOXB8P17481 243 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 TM4SF1P30408 202 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 SERPINB5P36952 375 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RGS2P41220 211 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ALDH1A3P47895 512 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RENBPP51606 427 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 OAZ1P54368 228 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CEP78Q5JTW2 689 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 C6orf10Q5SRN2 563 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 NBPF12Q5TAG4 269 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 DENND1BQ6P3S1 775 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 AAGABQ6PD74 315 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RBM12BQ8IXT5 1001 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 CCDC185Q8N715 623 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 DNERQ8NFT8 737 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RP9Q8TA86 221 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 HTR3CQ8WXA8 447 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 SLCO1B3Q9NPD5 702 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.13□□□□□ -1.91
LPP-221ENST00000618621 EFR3BQ9Y2G0 817 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 HEATR9A2RTY3 570 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 IQCA1LA6NCM1 817 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 AHCYL1O43865 530 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 SUPT20HL2P0C7V6 817 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CYP2C9P11712 490 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 MYL4P12829 197 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ZNF143P52747 638 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 FOLH1Q04609 750 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 DPYSQ14117 519 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 HIST2H2ACQ16777 129 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 C10orf120Q5SQS8 335 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 HIST2H2AA3Q6FI13 130 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 GPSM1Q86YR5 675 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TBC1D19Q8N5T2 526 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 FAM13CQ8NE31 585 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ZNF483Q8TF39 744 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 HAS1Q92839 578 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 APOL5Q9BWW9 433 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ERAP1Q9NZ08 941 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 SNX9Q9Y5X1 595 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 E9PBE3 544 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TRUB2O95900 331 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 ARP10275 920 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RAB32Q13637 225 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 N4BP2L1Q5TBK1 243 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 DEFB129Q9H1M3 183 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ATXN10Q9UBB4 475 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 PLLPQ9Y342 182 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 A0A087X1B8 175 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 GRAP2O75791 330 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ME2P23368 584 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TTKP33981 857 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 SOX6P35712 828 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TIGD7Q6NT04 549 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 MFSD7Q6UXD7 560 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 DHFR2Q86XF0 187 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 OR6J1Q8NGC5 347 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ZNF398Q8TD17 642 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ACER1Q8TDN7 264 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 MPP4Q96JB8 637 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 MAGED4Q96JG8 741 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 PTPRHQ9HD43 1115 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms