RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 CD207Q9UJ71 328 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 DSEQ9UL01 958 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 MTMR6Q9Y217 621 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 USP15Q9Y4E8 981 aaPredicted RBP5.02□□□□□ -1.61
CUL3-216ENST00000617432 CUL9Q8IWT3 2517 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 A0A087X0B3 334 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.01□□□□□ -1.61
CUL3-216ENST00000617432 TISP43B9A030 160 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 I3L4J1 428 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 SLC16A4O15374 487 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 ASAP2O43150 1006 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 RECQL4O94761 1208 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 EYA4O95677 639 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 CXCL14O95715 111 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 HARSP12081 509 aaKnown RBP5.01□□□□□ -1.61
CUL3-216ENST00000617432 RPL17P18621 184 aaKnown RBP5.01□□□□□ -1.61
CUL3-216ENST00000617432 SYT1P21579 422 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 GRK2P25098 689 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 MARCKSP29966 332 aaPredicted RBP5.01□□□□□ -1.61
CUL3-216ENST00000617432 GRK3P35626 688 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 OR1G1P47890 313 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 NPTX2P47972 431 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 RAB27AP51159 221 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 SLC12A3P55017 1021 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 OSTNP61366 133 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 PPP2R2AP63151 447 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 DSC1Q08554 894 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 ORC2Q13416 577 aaPredicted RBP5.01□□□□□ -1.61
CUL3-216ENST00000617432 TFDP1Q14186 410 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 MXD4Q14582 209 aaPredicted RBP5.01□□□□□ -1.61
CUL3-216ENST00000617432 KARSQ15046 597 aaKnown RBP5.01□□□□□ -1.61
CUL3-216ENST00000617432 PTPAQ15257 358 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 PTPN14Q15678 1187 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 NAB2Q15742 525 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 AAK1Q2M2I8 961 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 WDR72Q3MJ13 1102 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 NAALADL2Q58DX5 795 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 ZBTB41Q5SVQ8 909 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 HAUS3Q68CZ6 603 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 ANKRD54Q6NXT1 300 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 NOTUMQ6P988 496 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 C1orf186Q6ZWK4 172 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 LARP4Q71RC2 724 aaKnown RBP eCLIP5.01□□□□□ -1.61
CUL3-216ENST00000617432 VRK3Q8IV63 474 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 SMRP1Q8NCR6 262 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 ERMNQ8TAM6 284 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 DEPTORQ8TB45 409 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 TMEM176AQ96HP8 235 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 TARS2Q9BW92 718 aaKnown RBP5.01□□□□□ -1.61
CUL3-216ENST00000617432 MRPL9Q9BYD2 267 aaKnown RBP5.01□□□□□ -1.61
CUL3-216ENST00000617432 CDT1Q9H211 546 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 S1PR5Q9H228 398 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 BLOC1S4Q9NUP1 217 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 FBXO10Q9UK96 956 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 GDAQ9Y2T3 454 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 COX11Q9Y6N1 276 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 TTC28Q96AY4 2481 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 COL4A3Q01955 1670 aa5.01□□□□□ -1.61
CUL3-216ENST00000617432 TDRD15B5MCY1 1934 aaKnown RBP5□□□□□ -1.61
CUL3-216ENST00000617432 MYH15Q9Y2K3 1946 aa5□□□□□ -1.61
CUL3-216ENST00000617432 A0A1B0GUA9 196 aa5□□□□□ -1.61
CUL3-216ENST00000617432 CCDC169A6NNP5 214 aa5□□□□□ -1.61
CUL3-216ENST00000617432 INPPL1O15357 1258 aa5□□□□□ -1.61
CUL3-216ENST00000617432 ADAM12O43184 909 aa5□□□□□ -1.61
CUL3-216ENST00000617432 CNPP09543 421 aaKnown RBP5□□□□□ -1.61
CUL3-216ENST00000617432 PLA2G4BP0C869 781 aa5□□□□□ -1.61
CUL3-216ENST00000617432 SPATA31D3P0C874 917 aa5□□□□□ -1.61
CUL3-216ENST00000617432 CTSAP10619 480 aa5□□□□□ -1.61
CUL3-216ENST00000617432 XRCC6P12956 609 aaKnown RBP eCLIP5□□□□□ -1.61
CUL3-216ENST00000617432 PRPHP41219 470 aa5□□□□□ -1.61
CUL3-216ENST00000617432 NAMPTP43490 491 aa5□□□□□ -1.61
CUL3-216ENST00000617432 UBE3AQ05086 875 aa5□□□□□ -1.61
CUL3-216ENST00000617432 SPAG1Q07617 926 aa5□□□□□ -1.61
CUL3-216ENST00000617432 COASYQ13057 564 aa5□□□□□ -1.61
CUL3-216ENST00000617432 PRPF4BQ13523 1007 aaKnown RBP5□□□□□ -1.61
CUL3-216ENST00000617432 SMC1AQ14683 1233 aaKnown RBP5□□□□□ -1.61
CUL3-216ENST00000617432 RILPL1Q5EBL4 403 aa5□□□□□ -1.61
CUL3-216ENST00000617432 HYIQ5T013 277 aa5□□□□□ -1.61
CUL3-216ENST00000617432 RARS2Q5T160 578 aaKnown RBP5□□□□□ -1.61
CUL3-216ENST00000617432 ATF7IP2Q5U623 682 aa5□□□□□ -1.61
CUL3-216ENST00000617432 KRT79Q5XKE5 535 aa5□□□□□ -1.61
CUL3-216ENST00000617432 MRM1Q6IN84 353 aaKnown RBP5□□□□□ -1.61
CUL3-216ENST00000617432 SLC27A1Q6PCB7 646 aa5□□□□□ -1.61
CUL3-216ENST00000617432 PRSS55Q6UWB4 352 aaPredicted RBP5□□□□□ -1.61
CUL3-216ENST00000617432 CD300LGQ6UXG3 332 aa5□□□□□ -1.61
CUL3-216ENST00000617432 RSPO2Q6UXX9 243 aaPredicted RBP5□□□□□ -1.61
CUL3-216ENST00000617432 SPATA31D4Q6ZUB0 917 aa5□□□□□ -1.61
CUL3-216ENST00000617432 DDX53Q86TM3 631 aaKnown RBP5□□□□□ -1.61
CUL3-216ENST00000617432 ZBTB8OSQ8IWT0 167 aa5□□□□□ -1.61
CUL3-216ENST00000617432 ADHFE1Q8IWW8 467 aa5□□□□□ -1.61
CUL3-216ENST00000617432 RNF168Q8IYW5 571 aaPredicted RBP5□□□□□ -1.61
CUL3-216ENST00000617432 MRPL43Q8N983 215 aaKnown RBP5□□□□□ -1.61
CUL3-216ENST00000617432 MCPH1Q8NEM0 835 aa5□□□□□ -1.61
CUL3-216ENST00000617432 URGCPQ8TCY9 931 aa5□□□□□ -1.61
CUL3-216ENST00000617432 SLC22A17Q8WUG5 538 aa5□□□□□ -1.61
CUL3-216ENST00000617432 SUSD6Q92537 303 aa5□□□□□ -1.61
CUL3-216ENST00000617432 PGBD4Q96DM1 585 aa5□□□□□ -1.61
CUL3-216ENST00000617432 EPSTI1Q96J88 318 aa5□□□□□ -1.61
CUL3-216ENST00000617432 RPGRIP1Q96KN7 1286 aa5□□□□□ -1.61
CUL3-216ENST00000617432 ZMAT2Q96NC0 199 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms