RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 BNIPLQ7Z465 357 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 METTL3Q86U44 580 aaKnown RBP8.05□□□□□ -1.12
NEK3-207ENST00000617054 NAT8LQ8N9F0 302 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 VN1R3Q9BXE9 311 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 ETNK1Q9HBU6 452 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 MLXIPLQ9NP71 852 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 NDFIP2Q9NV92 336 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 GMIPQ9P107 970 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 NLRC5Q86WI3 1866 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 TRIM43BA6NCK2 446 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 RASGRF2O14827 1237 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 LRIG2O94898 1065 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 SPATA31D3P0C874 917 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 GBP1P32455 592 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 LBX1P52954 281 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 FOXR1Q6PIV2 292 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 SPATA31D4Q6ZUB0 917 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 DENND5BQ6ZUT9 1274 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 AGGF1Q8N302 714 aaeCLIP8.05□□□□□ -1.12
NEK3-207ENST00000617054 TRIM43Q96BQ3 446 aaPredicted RBP8.05□□□□□ -1.12
NEK3-207ENST00000617054 ZNF333Q96JL9 665 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 PRDM12Q9H4Q4 367 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 MPP6Q9NZW5 540 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 CHMP2BQ9UQN3 213 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 SCAMP3O14828 347 aaKnown RBP8.05□□□□□ -1.12
NEK3-207ENST00000617054 RGS16O15492 202 aaPredicted RBP8.05□□□□□ -1.12
NEK3-207ENST00000617054 NUDT17P0C025 328 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 TGM2P21980 687 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 OR1D2P34982 312 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 CA8P35219 290 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 GNGT1P63211 74 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 CRADDP78560 199 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 EFEMP1Q12805 493 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 AUHQ13825 339 aaKnown RBP8.05□□□□□ -1.12
NEK3-207ENST00000617054 IKBKEQ14164 716 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 MAPRE1Q15691 268 aaKnown RBP8.05□□□□□ -1.12
NEK3-207ENST00000617054 HIF1AQ16665 826 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 RASIP1Q5U651 963 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 DNAJC14Q6Y2X3 702 aaPredicted RBP8.05□□□□□ -1.12
NEK3-207ENST00000617054 ARHGAP36Q6ZRI8 547 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 PPIL6Q8IXY8 311 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 ZMIZ1Q9ULJ6 1067 aa8.05□□□□□ -1.12
NEK3-207ENST00000617054 STIP1P31948 543 aaKnown RBP8.04□□□□□ -1.12
NEK3-207ENST00000617054 ACTN2P35609 894 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 SEC24CP53992 1094 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 GPX6P59796 221 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 TPI1P60174 286 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 SPARCL1Q14515 664 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 MORF4L2Q15014 288 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 HEATR6Q6AI08 1181 aaKnown RBP8.04□□□□□ -1.12
NEK3-207ENST00000617054 DCP1BQ8IZD4 617 aaKnown RBP8.04□□□□□ -1.12
NEK3-207ENST00000617054 NUP93Q8N1F7 819 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 FBXO36Q8NEA4 188 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 EXOC4Q96A65 974 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 AGAP3Q96P47 875 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 TTPALQ9BTX7 342 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 CAPS2Q9BXY5 557 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 FAM107BQ9H098 131 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 ELAC1Q9H777 363 aaKnown RBP8.04□□□□□ -1.12
NEK3-207ENST00000617054 PCDHB5Q9Y5E4 795 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 SF3B1O75533 1304 aaKnown RBP eCLIP8.04□□□□□ -1.12
NEK3-207ENST00000617054 PTPRDP23468 1912 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 WDR27A2RRH5 827 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 MTMR11A4FU01 709 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 MAP3K7O43318 606 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 FGFR3P22607 806 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 TAF10Q12962 218 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 SLC45A4Q5BKX6 768 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 ZNF280DQ6N043 979 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 C3orf62Q6ZUJ4 267 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 TRMT10CQ7L0Y3 403 aaKnown RBP8.04□□□□□ -1.12
NEK3-207ENST00000617054 C14orf80Q86SX3 495 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 MPP5Q8N3R9 675 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 MGARPQ8TDB4 240 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 PYROXD1Q8WU10 500 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 TFB1MQ8WVM0 346 aaKnown RBP8.04□□□□□ -1.12
NEK3-207ENST00000617054 P2RY11Q96G91 374 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 SELENOSQ9BQE4 189 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 PPANQ9NQ55 473 aaKnown RBP8.04□□□□□ -1.12
NEK3-207ENST00000617054 UBP1Q9NZI7 540 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 TBX21Q9UL17 535 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 TTLL3Q9Y4R7 772 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 SHROOM3Q8TF72 1996 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 TMEM189-UBE2V1I3L0A0 370 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 USP12O75317 370 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 PAGE1O75459 146 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 DGKIO75912 1065 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 CXCL10P02778 98 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 CLTBP09497 229 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 ELK3P41970 407 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 CXCR3P49682 368 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 IRAK1P51617 712 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 CAV1Q03135 178 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 DPYSQ14117 519 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 MRPL58Q14197 206 aaKnown RBP8.04□□□□□ -1.12
NEK3-207ENST00000617054 TMEM164Q5U3C3 297 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 KIAA1841Q6NSI8 718 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 BBOF1Q8ND07 529 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 USP33Q8TEY7 942 aa8.04□□□□□ -1.12
NEK3-207ENST00000617054 HTR3CQ8WXA8 447 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms