RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, human

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-222	ENST00000612341	ABCG1	P45844	678 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	HIC1	Q14526	733 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	SYPL2	Q5VXT5	272 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	SLC26A9	Q7LBE3	791 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	NT5DC4	Q86YG4	428 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	NPLOC4	Q8TAT6	608 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	DTX3L	Q8TDB6	740 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	RTP4	Q96DX8	246 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	MAML3	Q96JK9	1138 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	TINF2	Q9BSI4	451 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	UBQLN1	Q9UMX0	589 aa	Known RBP	13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	CCDC78	A2IDD5	438 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	TREH	O43280	583 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	RARB	P10826	455 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	TSHR	P16473	764 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	KCNA4	P22459	653 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	PRKCH	P24723	683 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	ALDH18A1	P54886	795 aa	Known RBP	13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	AQP5	P55064	265 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	SNX16	P57768	344 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	BEX3	Q00994	111 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	TAF11	Q15544	211 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	ZBTB6	Q15916	424 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	HFE2	Q6ZVN8	426 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	ADGRF2	Q8IZF7	708 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	PGBD4	Q96DM1	585 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	NSL1	Q96IY1	281 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	PLEKHA5	Q9HAU0	1116 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	RNPEPL1	Q9HAU8	725 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	PSAT1	Q9Y617	370 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	LRRC37A2	A6NM11	1700 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	RNF103	O00237	685 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	LYPLA1	O75608	230 aa	Predicted RBP	13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	RTN3	O95197	1032 aa	Predicted RBP	13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	STAU1	O95793	577 aa	Known RBP	13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	SETSIP	P0DME0	302 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	PSMB4	P28070	264 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	MLH1	P40692	756 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	MAP3K7CL	P57077	242 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	RPL10A	P62906	217 aa	Known RBP	13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	PPP2R5D	Q14738	602 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	KHDC1	Q4VXA5	237 aa	Known RBP	13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	CHSY1	Q86X52	802 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	USP6NL	Q92738	828 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	EPAS1	Q99814	870 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	ARHGEF4	Q9NR80	690 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	CNTN3	Q9P232	1028 aa		13.29	□□□□□ -0.28
SMTN-222	ENST00000612341	MTO1	Q9Y2Z2	717 aa	Known RBP	13.29	□□□□□ -0.28
SMTN-222	ENST00000612341		H3BRJ5	948 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	CCDC22	O60826	627 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	GCAT	O75600	419 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	DARS	P14868	501 aa	Known RBP	13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	PDE1B	Q01064	536 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	TWF2	Q6IBS0	349 aa	Known RBP	13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	OSTM1	Q86WC4	334 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	LRRC52	Q8N7C0	313 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	ARRDC4	Q8NCT1	418 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	P2RY11	Q96G91	374 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	LRRC4	Q9HBW1	653 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	SLC5A4	Q9NY91	659 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	COL1A2	P08123	1366 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	RBM47	A0AV96	593 aa	Known RBP	13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	MEIS3P2	A8K0S8	358 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	CAPN9	O14815	690 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	ERVK-10	P10266	1014 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	PTPN9	P43378	593 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	KPNB1	Q14974	876 aa	Known RBP	13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	CCDC6	Q16204	474 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	PPM1J	Q5JR12	505 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	WSCD1	Q658N2	575 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	PID1	Q7Z2X4	250 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	UNC93A	Q86WB7	457 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	FBXO27	Q8NI29	283 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	BRI3BP	Q8WY22	251 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	PLEKHG4B	Q96PX9	1271 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	APOL2	Q9BQE5	337 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	BTBD10	Q9BSF8	475 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	PRDM12	Q9H4Q4	367 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	PNPLA8	Q9NP80	782 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	TRDMT1	O14717	391 aa	Known RBP	13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	ZSCAN9	O15535	394 aa	Predicted RBP	13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	CALB2	P22676	271 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	TAF6	P49848	677 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	B3GALNT2	Q8NCR0	500 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	STKLD1	Q8NE28	680 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	SLC7A14	Q8TBB6	771 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	STK32A	Q8WU08	396 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	SKA1	Q96BD8	255 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	EBF4	Q9BQW3	602 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	TAS2R1	Q9NYW7	299 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	PCDHA11	Q9Y5I1	949 aa		13.28	□□□□□ -0.28
SMTN-222	ENST00000612341	TPBGL	P0DKB5	382 aa		13.27	□□□□□ -0.28
SMTN-222	ENST00000612341	ZFX	P17010	805 aa	Predicted RBP	13.27	□□□□□ -0.28
SMTN-222	ENST00000612341	MATK	P42679	507 aa		13.27	□□□□□ -0.28
SMTN-222	ENST00000612341	ARHGAP17	Q68EM7	881 aa		13.27	□□□□□ -0.28
SMTN-222	ENST00000612341	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.27	□□□□□ -0.28
SMTN-222	ENST00000612341	HACE1	Q8IYU2	909 aa		13.27	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms