RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 MYRFQ9Y2G1 1151 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 GSC2O15499 205 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 BNIP3LO60238 219 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 TCEA3O75764 348 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 ASS1P00966 412 aaKnown RBP11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 IFNA8P32881 189 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 ALDH1A3P47895 512 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 ZNF135P52742 658 aaPredicted RBP11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 SLC25A3Q00325 362 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 DHFR2Q86XF0 187 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 HOMEZQ8IX15 550 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 GPRC5AQ8NFJ5 357 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 IL31RAQ8NI17 732 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 GCNAQ96QF7 691 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 MROH8Q9H579 483 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 GPBP1L1Q9HC44 474 aaPredicted RBP11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 CASS4Q9NQ75 786 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 ETAA1Q9NY74 926 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 TSR3Q9UJK0 312 aaKnown RBP11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 NR5A2O00482 541 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 CYB561D2O14569 222 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 FASP25445 335 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 YWHAZP63104 245 aaKnown RBP11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 NFYCQ13952 458 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 UGCGQ16739 394 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 SPDYAQ5MJ70 313 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 TBCELQ5QJ74 424 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 C16orf46Q6P387 395 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 SCUBE3Q8IX30 993 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 SLCO2A1Q92959 643 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 FBXO6Q9NRD1 293 aaPredicted RBP11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 OLA1Q9NTK5 396 aaKnown RBP11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 ARL8BQ9NVJ2 186 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 SLC17A7Q9P2U7 560 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 RNF112Q9ULX5 631 aa11.18□□□□□ -0.62
CDC42EP3-206ENST00000611976 IGLV3-22A0A075B6J6 115 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 S100A5P33763 92 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 RECQLP46063 649 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 SNX17Q15036 470 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 UGT3A1Q6NUS8 523 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 ADGRD1Q6QNK2 874 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 B3GNT6Q6ZMB0 384 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 FBXO16Q8IX29 292 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 SLC44A1Q8WWI5 657 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 DACH2Q96NX9 599 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 ARHGEF3Q9NR81 526 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 KLK14Q9P0G3 267 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 LZTS1Q9Y250 596 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 PMM2O15305 246 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 DAB1O75553 588 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 COX4I1P13073 169 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 TMED10P49755 219 aaKnown RBP11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 TKTL1P51854 596 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 CHRNB3Q05901 458 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 BLMHQ13867 455 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 FASTKQ14296 549 aaKnown RBP11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 SLC1A5Q15758 541 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 ATP6V0D2Q8N8Y2 350 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 B4GALNT2Q8NHY0 566 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 PCDHGB4Q9UN71 923 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 TPBGLP0DKB5 382 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 LHX1P48742 406 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 SAMD4BQ5PRF9 694 aaKnown RBP11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 TMC7Q7Z402 723 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 C2orf69Q8N8R5 385 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 REPS2Q8NFH8 660 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 OR5B17Q8NGF7 314 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 RFWD2Q8NHY2 731 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 SNRNP27Q8WVK2 155 aaKnown RBP11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 SLC25A23Q9BV35 468 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 COG4Q9H9E3 785 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 PPP2R3BQ9Y5P8 575 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 HIST1H2AGP0C0S8 130 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 HIST1H2ADP20671 130 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 C15orf59Q2T9L4 293 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 TRIM16LQ309B1 348 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 IL31Q6EBC2 164 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 DRICH1Q6PGQ1 229 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 FAM183BPQ6ZVS7 135 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 ALYREFQ86V81 257 aaKnown RBP11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 HIST1H2AHQ96KK5 128 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 HIST1H2AJQ99878 128 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 H2AFJQ9BTM1 129 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 LHX5Q9H2C1 402 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 SYTL2Q9HCH5 934 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 CHCHD3Q9NX63 227 aaKnown RBP11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 C6orf203Q9P0P8 240 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 V9GYQ6 96 aa11.17□□□□□ -0.62
CDC42EP3-206ENST00000611976 CHRNB2P17787 502 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 MSLNQ13421 630 aaPredicted RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 PDK3Q15120 406 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 ANKRD13AQ8IZ07 590 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 SHISA4Q96DD7 197 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 C7orf26Q96N11 449 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 SNRNP25Q9BV90 132 aaKnown RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 CEP41Q9BYV8 373 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 WDR41Q9HAD4 459 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 DMAP1Q9NPF5 467 aaPredicted RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 AFF4Q9UHB7 1163 aaKnown RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 TRMT6Q9UJA5 497 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms