RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 UNQ6494/PRO21346Q6UXR6 183 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 KIAA0907Q7Z7F0 614 aaPredicted RBP17.7■□□□□ 0.42
SCAF1-204ENST00000601038 UNC45BQ8IWX7 931 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.7■□□□□ 0.42
SCAF1-204ENST00000601038 OR2I1PQ8NGU4 316 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 NELFBQ8WX92 580 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 KAT5Q92993 513 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 SCNM1Q9BWG6 230 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 TMEM245Q9H330 911 aa17.7■□□□□ 0.42
SCAF1-204ENST00000601038 CACNA1EQ15878 2313 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 A0A1B0GTW7 788 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 SPAARA0A1B0GVQ0 90 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 METTL12A8MUP2 240 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 MEI4A8MW99 385 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 C1QTNF9BB2RNN3 333 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 PIK3R2O00459 728 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 GJB3O75712 270 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 FBXO21O94952 628 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 LTFP02788 710 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 C1QTNF9P0C862 333 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 C7P10643 843 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 BMP6P22004 513 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 BRD2P25440 801 aaKnown RBP17.69■□□□□ 0.42
SCAF1-204ENST00000601038 SLC11A2P49281 568 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 SIM1P81133 766 aaPredicted RBP17.69■□□□□ 0.42
SCAF1-204ENST00000601038 RING1Q06587 406 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 HNRNPDQ14103 355 aaKnown RBP17.69■□□□□ 0.42
SCAF1-204ENST00000601038 PIK3R6Q5UE93 754 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 CHST9Q7L1S5 443 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 RRAGAQ7L523 313 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 ADIPOR2Q86V24 386 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 AHI1Q8N157 1196 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 EHBP1Q8NDI1 1231 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 OR2T3Q8NH03 318 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 GOLGA1Q92805 767 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 AZIN2Q96A70 460 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 ADAM33Q9BZ11 813 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 ZDHHC5Q9C0B5 715 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 ABCB8Q9NUT2 735 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 GGA2Q9UJY4 613 aa17.69■□□□□ 0.42
SCAF1-204ENST00000601038 IRAK2O43187 625 aa17.68■□□□□ 0.42
SCAF1-204ENST00000601038 GNA14O95837 355 aa17.68■□□□□ 0.42
SCAF1-204ENST00000601038 PABPC1P11940 636 aaKnown RBP17.68■□□□□ 0.42
SCAF1-204ENST00000601038 HLA-EP13747 358 aa17.68■□□□□ 0.42
SCAF1-204ENST00000601038 KCNH2Q12809 1159 aa17.68■□□□□ 0.42
SCAF1-204ENST00000601038 MORC3Q14149 939 aa17.68■□□□□ 0.42
SCAF1-204ENST00000601038 FNDC3BQ53EP0 1204 aaKnown RBP17.68■□□□□ 0.42
SCAF1-204ENST00000601038 DCAF12L1Q5VU92 463 aa17.68■□□□□ 0.42
SCAF1-204ENST00000601038 ARHGEF19Q8IW93 802 aa17.68■□□□□ 0.42
SCAF1-204ENST00000601038 TRIM59Q8IWR1 403 aa17.68■□□□□ 0.42
SCAF1-204ENST00000601038 CLEC4CQ8WTT0 213 aa17.68■□□□□ 0.42
SCAF1-204ENST00000601038 CYB5D2Q8WUJ1 264 aa17.68■□□□□ 0.42
SCAF1-204ENST00000601038 TMEM121BQ9BXQ6 578 aaPredicted RBP17.68■□□□□ 0.42
SCAF1-204ENST00000601038 PCED1AQ9H1Q7 454 aa17.68■□□□□ 0.42
SCAF1-204ENST00000601038 ACSL4O60488 711 aa17.67■□□□□ 0.42
SCAF1-204ENST00000601038 CALCAP01258 141 aa17.67■□□□□ 0.42
SCAF1-204ENST00000601038 ATP5BP06576 529 aaKnown RBP17.67■□□□□ 0.42
SCAF1-204ENST00000601038 DLDP09622 509 aaKnown RBP17.67■□□□□ 0.42
SCAF1-204ENST00000601038 SLC6A4P31645 630 aa17.67■□□□□ 0.42
SCAF1-204ENST00000601038 RDXP35241 583 aaKnown RBP17.67■□□□□ 0.42
SCAF1-204ENST00000601038 RPL34P49207 117 aaKnown RBP17.67■□□□□ 0.42
SCAF1-204ENST00000601038 SGSHP51688 502 aa17.67■□□□□ 0.42
SCAF1-204ENST00000601038 MARSP56192 900 aaKnown RBP17.67■□□□□ 0.42
SCAF1-204ENST00000601038 TBX4P57082 545 aa17.67■□□□□ 0.42
SCAF1-204ENST00000601038 GRIK2Q13002 908 aa17.67■□□□□ 0.42
SCAF1-204ENST00000601038 PTPRNQ16849 979 aa17.67■□□□□ 0.42
SCAF1-204ENST00000601038 FAM133BQ5BKY9 247 aaKnown RBP17.67■□□□□ 0.42
SCAF1-204ENST00000601038 MBLAC2Q68D91 279 aa17.67■□□□□ 0.42
SCAF1-204ENST00000601038 RFWD3Q6PCD5 774 aa17.67■□□□□ 0.42
SCAF1-204ENST00000601038 ZNF557Q8N988 423 aaPredicted RBP17.67■□□□□ 0.42
SCAF1-204ENST00000601038 KDF1Q8NAX2 398 aaPredicted RBP17.67■□□□□ 0.42
SCAF1-204ENST00000601038 MIR1-1HGQ9H1L0 117 aa17.67■□□□□ 0.42
SCAF1-204ENST00000601038 FBRSQ9HAH7 460 aa17.67■□□□□ 0.42
SCAF1-204ENST00000601038 CNTN6Q9UQ52 1028 aa17.67■□□□□ 0.42
SCAF1-204ENST00000601038 CTNND2Q9UQB3 1225 aa17.67■□□□□ 0.42
SCAF1-204ENST00000601038 GOLGA6L7A0A1B0GV03 622 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 H0Y626 953 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 BCAT2O15382 392 aaPredicted RBP17.66■□□□□ 0.42
SCAF1-204ENST00000601038 HYAL3O43820 417 aaPredicted RBP17.66■□□□□ 0.42
SCAF1-204ENST00000601038 TBL1XO60907 577 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 TRIM16O95361 564 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 FYNP06241 537 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 GPD2P43304 727 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 FAM193AP78312 1265 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 CACUL1Q86Y37 369 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 SCUBE3Q8IX30 993 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 ZCCHC9Q8N567 271 aaKnown RBP17.66■□□□□ 0.42
SCAF1-204ENST00000601038 WFDC5Q8TCV5 224 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 GATA6Q92908 595 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 KREMEN1Q96MU8 473 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 DDX50Q9BQ39 737 aaKnown RBP17.66■□□□□ 0.42
SCAF1-204ENST00000601038 MIS12Q9H081 205 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 LHX5Q9H2C1 402 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 PRSS16Q9NQE7 514 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 NEUROG3Q9Y4Z2 214 aa17.66■□□□□ 0.42
SCAF1-204ENST00000601038 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.66■□□□□ 0.42
SCAF1-204ENST00000601038 USP24Q9UPU5 2620 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 TMEM8BA6NDV4 472 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 BIN1O00499 593 aa17.65■□□□□ 0.42
SCAF1-204ENST00000601038 SART1O43290 800 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms