RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 ZNF394Q53GI3 561 aa20.5■□□□□ 0.87
PRKCSH-216ENST00000592445 GATAD2AQ86YP4 633 aa20.5■□□□□ 0.87
PRKCSH-216ENST00000592445 FAM217AQ8IXS0 508 aa20.5■□□□□ 0.87
PRKCSH-216ENST00000592445 SKA1Q96BD8 255 aa20.5■□□□□ 0.87
PRKCSH-216ENST00000592445 ZNF396Q96N95 335 aaPredicted RBP20.5■□□□□ 0.87
PRKCSH-216ENST00000592445 APOBEC3GQ9HC16 384 aaKnown RBP20.5■□□□□ 0.87
PRKCSH-216ENST00000592445 PRSS16Q9NQE7 514 aa20.5■□□□□ 0.87
PRKCSH-216ENST00000592445 ABCB8Q9NUT2 735 aa20.5■□□□□ 0.87
PRKCSH-216ENST00000592445 NCKAP1Q9Y2A7 1128 aa20.5■□□□□ 0.87
PRKCSH-216ENST00000592445 FRMD4BQ9Y2L6 1034 aa20.5■□□□□ 0.87
PRKCSH-216ENST00000592445 A0A1B0GTQ1 180 aa20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 VILLO15195 856 aa20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 PAPSS1O43252 624 aaPredicted RBP20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 C1QL1O75973 258 aa20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 LDOC1O95751 146 aaPredicted RBP20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 ABCB4P21439 1286 aa20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 CLDN6P56747 220 aa20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 RACK1P63244 317 aaKnown RBP20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 STK4Q13043 487 aa20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 PRAMEF14Q5SWL7 426 aa20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 ZNF776Q68DI1 518 aaPredicted RBP20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 KIAA0895LQ68EN5 471 aa20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 AHI1Q8N157 1196 aa20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 CCDC150Q8NCX0 1101 aa20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 GOLGA1Q92805 767 aa20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 CNDP2Q96KP4 475 aaKnown RBP20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 NIF3L1Q9GZT8 377 aa20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 PRORYQ9H606 182 aa20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 GGA2Q9UJY4 613 aa20.49■□□□□ 0.87
PRKCSH-216ENST00000592445 SHROOM3Q8TF72 1996 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 RFPL3O75679 317 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 IGHV4-34P06331 123 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 ATP5BP06576 529 aaKnown RBP20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 ITGAVP06756 1048 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 CDK4P11802 303 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 VAMP7P51809 220 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 SLC8A3P57103 927 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 PDE4CQ08493 712 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 DNAJC3Q13217 504 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 TRIP4Q15650 581 aaPredicted RBP20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 C1orf220Q5T0J3 134 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 ADIPOR2Q86V24 386 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 PIGZQ86VD9 579 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 FMNL3Q8IVF7 1028 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 GRAMD1CQ8IYS0 662 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 TMEM174Q8WUU8 243 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 TMA16Q96EY4 203 aaKnown RBP20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 SLC6A18Q96N87 628 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 FCRL3Q96P31 734 aaPredicted RBP20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 ELF4Q99607 663 aaPredicted RBP20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 ORAI3Q9BRQ5 295 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 FOXD4L1Q9NU39 408 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 FAM13BQ9NYF5 915 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 SUN2Q9UH99 717 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 RAI2Q9Y5P3 530 aa20.48■□□□□ 0.87
PRKCSH-216ENST00000592445 CBX4O00257 560 aa20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 TLX3O43711 291 aaPredicted RBP20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 DLDP09622 509 aaKnown RBP20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 C1SP09871 688 aa20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 C7P10643 843 aa20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 PABPC1P11940 636 aaKnown RBP20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 GCLMP48507 274 aa20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 ZNF445P59923 1031 aa20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 TARDBPQ13148 414 aaKnown RBP eCLIP20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 MBLAC2Q68D91 279 aa20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 CEP57L1Q8IYX8 460 aa20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 KIAA0895Q8NCT3 520 aa20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 TAS1R2Q8TE23 839 aa20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 BAP1Q92560 729 aa20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 UBXN6Q9BZV1 441 aa20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 KCTD10Q9H3F6 313 aa20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 EXOC1Q9NV70 894 aa20.47■□□□□ 0.87
PRKCSH-216ENST00000592445 A0A1W2PPC4 97 aa20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 PDXKO00764 312 aa20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 YEATS4O95619 227 aa20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 ZBED1O96006 694 aa20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 POLR2EP19388 210 aaKnown RBP20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 TKTL1P51854 596 aa20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 ADGRF1Q5T601 910 aa20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 ZNF605Q86T29 641 aa20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 EID2Q8N6I1 236 aa20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 RNF139Q8WU17 664 aa20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 PABPC3Q9H361 631 aaKnown RBP20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 MMRN2Q9H8L6 949 aa20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 AASDHPPTQ9NRN7 309 aa20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 OLA1Q9NTK5 396 aaKnown RBP20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 FBXL12Q9NXK8 326 aa20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 KNTC1P50748 2209 aa20.46■□□□□ 0.87
PRKCSH-216ENST00000592445 CAPN9O14815 690 aa20.45■□□□□ 0.86
PRKCSH-216ENST00000592445 TRIM49P0CI25 452 aa20.45■□□□□ 0.86
PRKCSH-216ENST00000592445 TRIM49CP0CI26 452 aa20.45■□□□□ 0.86
PRKCSH-216ENST00000592445 PDIA4P13667 645 aaKnown RBP20.45■□□□□ 0.86
PRKCSH-216ENST00000592445 RAB41Q5JT25 222 aa20.45■□□□□ 0.86
PRKCSH-216ENST00000592445 HES3Q5TGS1 186 aa20.45■□□□□ 0.86
PRKCSH-216ENST00000592445 USP30Q70CQ3 517 aa20.45■□□□□ 0.86
PRKCSH-216ENST00000592445 ZC3H3Q8IXZ2 948 aaKnown RBP20.45■□□□□ 0.86
PRKCSH-216ENST00000592445 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.45■□□□□ 0.86
PRKCSH-216ENST00000592445 LSM14AQ8ND56 463 aaKnown RBP20.45■□□□□ 0.86
PRKCSH-216ENST00000592445 NDRG1Q92597 394 aaKnown RBP20.45■□□□□ 0.86
PRKCSH-216ENST00000592445 ULBP1Q9BZM6 244 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms