RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 DHTKD1Q96HY7 919 aaPredicted RBP10.58□□□□□ -0.72
VMP1-214ENST00000592106 PCED1AQ9H1Q7 454 aa10.58□□□□□ -0.72
VMP1-214ENST00000592106 SLC6A17Q9H1V8 727 aa10.58□□□□□ -0.72
VMP1-214ENST00000592106 WSB2Q9NYS7 404 aaPredicted RBP10.58□□□□□ -0.72
VMP1-214ENST00000592106 USP36Q9P275 1121 aaKnown RBP10.58□□□□□ -0.72
VMP1-214ENST00000592106 PLA2G4CQ9UP65 541 aa10.58□□□□□ -0.72
VMP1-214ENST00000592106 PCDHB4Q9Y5E5 795 aa10.58□□□□□ -0.72
VMP1-214ENST00000592106 CEP192Q8TEP8 1941 aa10.58□□□□□ -0.72
VMP1-214ENST00000592106 EPG5Q9HCE0 2579 aa10.58□□□□□ -0.72
VMP1-214ENST00000592106 TRIM49BA6NDI0 452 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 PMM2O15305 246 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 SART1O43290 800 aaKnown RBP10.57□□□□□ -0.72
VMP1-214ENST00000592106 FBXO21O94952 628 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 CER1O95813 267 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 ATP5BP06576 529 aaKnown RBP10.57□□□□□ -0.72
VMP1-214ENST00000592106 LCP1P13796 627 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 SLC11A2P49281 568 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 DAOAP59103 153 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 SIM1P81133 766 aaPredicted RBP10.57□□□□□ -0.72
VMP1-214ENST00000592106 ADGRF1Q5T601 910 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 MSANTD2Q6P1R3 559 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 TMEM270Q6UE05 265 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 IL27RAQ6UWB1 636 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 LCLAT1Q6UWP7 414 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 PIP4P1Q86T03 277 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 UNC45BQ8IWX7 931 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 OR2T3Q8NH03 318 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 SPATA20Q8TB22 786 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 UBA3Q8TBC4 463 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 EDEM1Q92611 657 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 TMA16Q96EY4 203 aaKnown RBP10.57□□□□□ -0.72
VMP1-214ENST00000592106 TOE1Q96GM8 510 aaKnown RBP10.57□□□□□ -0.72
VMP1-214ENST00000592106 TRIM62Q9BVG3 475 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 NUP58Q9BVL2 599 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 GPR174Q9BXC1 333 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 LHX5Q9H2C1 402 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 ITM2CQ9NQX7 267 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 DNAAF2Q9NVR5 837 aaKnown RBP10.57□□□□□ -0.72
VMP1-214ENST00000592106 SFMBT1Q9UHJ3 866 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 STOML2Q9UJZ1 356 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 PCDHB9Q9Y5E1 797 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 FRYLO94915 3013 aa10.57□□□□□ -0.72
VMP1-214ENST00000592106 YJEFN3A6XGL0 299 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 E7ENQ6 273 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 TULP2O00295 520 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 IRAK2O43187 625 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 TSPAN3O60637 253 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 GNA14O95837 355 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 LTFP02788 710 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 PABPC1P11940 636 aaKnown RBP10.56□□□□□ -0.72
VMP1-214ENST00000592106 PRKCHP24723 683 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 HOXD9P28356 352 aaPredicted RBP10.56□□□□□ -0.72
VMP1-214ENST00000592106 RGS7P49802 495 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 PMS1P54277 932 aaKnown RBP10.56□□□□□ -0.72
VMP1-214ENST00000592106 CNGA2Q16280 664 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 ZNF423Q2M1K9 1284 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 PROX2Q3B8N5 592 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 TTC31Q49AM3 519 aaPredicted RBP10.56□□□□□ -0.72
VMP1-214ENST00000592106 MPP7Q5T2T1 576 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 DCAF12L1Q5VU92 463 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 KLHL10Q6JEL2 608 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 FOXR2Q6PJQ5 311 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 CHST9Q7L1S5 443 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 BHLHA9Q7RTU4 235 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 ELOA2Q8IYF1 753 aaPredicted RBP10.56□□□□□ -0.72
VMP1-214ENST00000592106 ZCCHC9Q8N567 271 aaKnown RBP10.56□□□□□ -0.72
VMP1-214ENST00000592106 UBR7Q8N806 425 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 RBBP8NLQ8NC74 664 aaPredicted RBP10.56□□□□□ -0.72
VMP1-214ENST00000592106 DNASE2BQ8WZ79 361 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 SNX19Q92543 992 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 HSFY1Q96LI6 401 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 SCNM1Q9BWG6 230 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 MKRN2Q9H000 416 aaKnown RBP10.56□□□□□ -0.72
VMP1-214ENST00000592106 MIR1-1HGQ9H1L0 117 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 CD93Q9NPY3 652 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 FSCN3Q9NQT6 498 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 GGA2Q9UJY4 613 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.56□□□□□ -0.72
VMP1-214ENST00000592106 NEUROG3Q9Y4Z2 214 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 PCDH15Q96QU1 1955 aa10.56□□□□□ -0.72
VMP1-214ENST00000592106 SPTBN2O15020 2390 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 SPAARA0A1B0GVQ0 90 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 METTL12A8MUP2 240 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 C1QTNF9BB2RNN3 333 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 BHMG1C9JSJ3 638 aaPredicted RBP10.55□□□□□ -0.72
VMP1-214ENST00000592106 MSI1O43347 362 aaKnown RBP10.55□□□□□ -0.72
VMP1-214ENST00000592106 MED7O43513 233 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 FGFR1OPO95684 399 aaKnown RBP10.55□□□□□ -0.72
VMP1-214ENST00000592106 IGLV3-19P01714 112 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 DNTTP04053 509 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 C1QTNF9P0C862 333 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 POLR2EP19388 210 aaKnown RBP10.55□□□□□ -0.72
VMP1-214ENST00000592106 BRD2P25440 801 aaKnown RBP10.55□□□□□ -0.72
VMP1-214ENST00000592106 HLA-FP30511 346 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 ACADSBP45954 432 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 TPMTP51580 245 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 COPAP53621 1224 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 TBX4P57082 545 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 ST8SIA6P61647 398 aa10.55□□□□□ -0.72
VMP1-214ENST00000592106 GCNT1Q02742 428 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms