RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 GGA2Q9UJY4 613 aa21.28■■□□□ 1
TOP3A-219ENST00000584887 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.28■■□□□ 1
TOP3A-219ENST00000584887 USP24Q9UPU5 2620 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 GOLGA6L7A0A1B0GV03 622 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 SPAARA0A1B0GVQ0 90 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 PCNX2A6NKB5 2137 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 TBL1XO60907 577 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 FBXO21O94952 628 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 LATS1O95835 1130 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 GNA14O95837 355 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 AFPP02771 609 aaKnown RBP21.27■■□□□ 1
TOP3A-219ENST00000584887 PABPC1P11940 636 aaKnown RBP21.27■■□□□ 1
TOP3A-219ENST00000584887 SLC11A2P49281 568 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 TPMTP51580 245 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 TBX4P57082 545 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 NUGGCQ68CJ6 796 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 METTL3Q86U44 580 aaKnown RBP21.27■■□□□ 1
TOP3A-219ENST00000584887 TRIM59Q8IWR1 403 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 EHBP1Q8NDI1 1231 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 FAM149B1Q96BN6 582 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 SRRTQ9BXP5 876 aaKnown RBP21.27■■□□□ 1
TOP3A-219ENST00000584887 ITM2CQ9NQX7 267 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 WSB2Q9NYS7 404 aaPredicted RBP21.27■■□□□ 1
TOP3A-219ENST00000584887 STIM2Q9P246 746 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 PLA2G4CQ9UP65 541 aa21.27■■□□□ 1
TOP3A-219ENST00000584887 CKAP5Q14008 2032 aa21.26■□□□□ 0.99
TOP3A-219ENST00000584887 KCNJ18B7U540 433 aa21.26■□□□□ 0.99
TOP3A-219ENST00000584887 TOP3BO95985 862 aaKnown RBP21.26■□□□□ 0.99
TOP3A-219ENST00000584887 GCNT1Q02742 428 aa21.26■□□□□ 0.99
TOP3A-219ENST00000584887 SEMA3BQ13214 749 aa21.26■□□□□ 0.99
TOP3A-219ENST00000584887 CREBRFQ8IUR6 639 aa21.26■□□□□ 0.99
TOP3A-219ENST00000584887 UNC45BQ8IWX7 931 aa21.26■□□□□ 0.99
TOP3A-219ENST00000584887 ZCCHC9Q8N567 271 aaKnown RBP21.26■□□□□ 0.99
TOP3A-219ENST00000584887 HSFY1Q96LI6 401 aa21.26■□□□□ 0.99
TOP3A-219ENST00000584887 KREMEN1Q96MU8 473 aa21.26■□□□□ 0.99
TOP3A-219ENST00000584887 STOML2Q9UJZ1 356 aa21.26■□□□□ 0.99
TOP3A-219ENST00000584887 PCDH15Q96QU1 1955 aa21.25■□□□□ 0.99
TOP3A-219ENST00000584887 KMT2BQ9UMN6 2715 aaPredicted RBP21.25■□□□□ 0.99
TOP3A-219ENST00000584887 ACSL4O60488 711 aa21.25■□□□□ 0.99
TOP3A-219ENST00000584887 OXTRP30559 389 aa21.25■□□□□ 0.99
TOP3A-219ENST00000584887 SLC6A4P31645 630 aa21.25■□□□□ 0.99
TOP3A-219ENST00000584887 COPAP53621 1224 aa21.25■□□□□ 0.99
TOP3A-219ENST00000584887 SIM1P81133 766 aaPredicted RBP21.25■□□□□ 0.99
TOP3A-219ENST00000584887 MBLAC2Q68D91 279 aa21.25■□□□□ 0.99
TOP3A-219ENST00000584887 FOXR2Q6PJQ5 311 aa21.25■□□□□ 0.99
TOP3A-219ENST00000584887 AHI1Q8N157 1196 aa21.25■□□□□ 0.99
TOP3A-219ENST00000584887 OR2T3Q8NH03 318 aa21.25■□□□□ 0.99
TOP3A-219ENST00000584887 WFDC5Q8TCV5 224 aa21.25■□□□□ 0.99
TOP3A-219ENST00000584887 SNX19Q92543 992 aa21.25■□□□□ 0.99
TOP3A-219ENST00000584887 LHX5Q9H2C1 402 aa21.25■□□□□ 0.99
TOP3A-219ENST00000584887 MOCS2O96007 188 aaPredicted RBP21.24■□□□□ 0.99
TOP3A-219ENST00000584887 IGLV3-27P01718 113 aa21.24■□□□□ 0.99
TOP3A-219ENST00000584887 PIK3R6Q5UE93 754 aa21.24■□□□□ 0.99
TOP3A-219ENST00000584887 DCAF12L1Q5VU92 463 aa21.24■□□□□ 0.99
TOP3A-219ENST00000584887 DENND1BQ6P3S1 775 aa21.24■□□□□ 0.99
TOP3A-219ENST00000584887 PIP4P1Q86T03 277 aa21.24■□□□□ 0.99
TOP3A-219ENST00000584887 ADIPOR2Q86V24 386 aa21.24■□□□□ 0.99
TOP3A-219ENST00000584887 SCUBE3Q8IX30 993 aa21.24■□□□□ 0.99
TOP3A-219ENST00000584887 HJURPQ8NCD3 748 aaPredicted RBP21.24■□□□□ 0.99
TOP3A-219ENST00000584887 ADAM32Q8TC27 787 aa21.24■□□□□ 0.99
TOP3A-219ENST00000584887 DQX1Q8TE96 717 aaKnown RBP21.24■□□□□ 0.99
TOP3A-219ENST00000584887 NUP58Q9BVL2 599 aa21.24■□□□□ 0.99
TOP3A-219ENST00000584887 UBE2TQ9NPD8 197 aaPredicted RBP21.24■□□□□ 0.99
TOP3A-219ENST00000584887 NUMA1Q14980 2115 aa21.23■□□□□ 0.99
TOP3A-219ENST00000584887 A0A1B0GTW7 788 aa21.23■□□□□ 0.99
TOP3A-219ENST00000584887 TYW5A2RUC4 315 aaKnown RBP21.23■□□□□ 0.99
TOP3A-219ENST00000584887 LETM1O95202 739 aaPredicted RBP21.23■□□□□ 0.99
TOP3A-219ENST00000584887 FGFR1OPO95684 399 aaKnown RBP21.23■□□□□ 0.99
TOP3A-219ENST00000584887 ATP5BP06576 529 aaKnown RBP21.23■□□□□ 0.99
TOP3A-219ENST00000584887 POLR2EP19388 210 aaKnown RBP21.23■□□□□ 0.99
TOP3A-219ENST00000584887 CD70P32970 193 aa21.23■□□□□ 0.99
TOP3A-219ENST00000584887 RING1Q06587 406 aa21.23■□□□□ 0.99
TOP3A-219ENST00000584887 GRIK2Q13002 908 aa21.23■□□□□ 0.99
TOP3A-219ENST00000584887 CAMK2GQ13555 558 aaPredicted RBP21.23■□□□□ 0.99
TOP3A-219ENST00000584887 FAM133BQ5BKY9 247 aaKnown RBP21.23■□□□□ 0.99
TOP3A-219ENST00000584887 NADSYN1Q6IA69 706 aa21.23■□□□□ 0.99
TOP3A-219ENST00000584887 MFN1Q8IWA4 741 aa21.23■□□□□ 0.99
TOP3A-219ENST00000584887 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.23■□□□□ 0.99
TOP3A-219ENST00000584887 SERPINB11Q96P15 392 aa21.23■□□□□ 0.99
TOP3A-219ENST00000584887 DDX50Q9BQ39 737 aaKnown RBP21.23■□□□□ 0.99
TOP3A-219ENST00000584887 CRACR2AQ9BSW2 395 aa21.23■□□□□ 0.99
TOP3A-219ENST00000584887 NAALADL1Q9UQQ1 740 aa21.23■□□□□ 0.99
TOP3A-219ENST00000584887 C1QTNF9BB2RNN3 333 aa21.22■□□□□ 0.99
TOP3A-219ENST00000584887 CAPN9O14815 690 aa21.22■□□□□ 0.99
TOP3A-219ENST00000584887 IRAK2O43187 625 aa21.22■□□□□ 0.99
TOP3A-219ENST00000584887 SART1O43290 800 aaKnown RBP21.22■□□□□ 0.99
TOP3A-219ENST00000584887 THAP12O43422 761 aa21.22■□□□□ 0.99
TOP3A-219ENST00000584887 DLDP09622 509 aaKnown RBP21.22■□□□□ 0.99
TOP3A-219ENST00000584887 C1QTNF9P0C862 333 aa21.22■□□□□ 0.99
TOP3A-219ENST00000584887 USP8P40818 1118 aa21.22■□□□□ 0.99
TOP3A-219ENST00000584887 UNQ6494/PRO21346Q6UXR6 183 aa21.22■□□□□ 0.99
TOP3A-219ENST00000584887 CADM4Q8NFZ8 388 aa21.22■□□□□ 0.99
TOP3A-219ENST00000584887 FCRL2Q96LA5 508 aaPredicted RBP21.22■□□□□ 0.99
TOP3A-219ENST00000584887 PRICKLE1Q96MT3 831 aaPredicted RBP21.22■□□□□ 0.99
TOP3A-219ENST00000584887 SCNM1Q9BWG6 230 aa21.22■□□□□ 0.99
TOP3A-219ENST00000584887 ADAM33Q9BZ11 813 aa21.22■□□□□ 0.99
TOP3A-219ENST00000584887 TMEM245Q9H330 911 aa21.22■□□□□ 0.99
TOP3A-219ENST00000584887 DNAAF2Q9NVR5 837 aaKnown RBP21.22■□□□□ 0.99
TOP3A-219ENST00000584887 EIF2B4Q9UI10 523 aaKnown RBP21.22■□□□□ 0.99
TOP3A-219ENST00000584887 IGF2RP11717 2491 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms