RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 OTOAQ7RTW8 1153 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 PIWIL4Q7Z3Z4 852 aaKnown RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 TSPAN14Q8NG11 270 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 OR56A4Q8NGH8 313 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 ACSF2Q96CM8 615 aaPredicted RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 DGCR14Q96DF8 476 aaKnown RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 EMILIN2Q9BXX0 1053 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 ANAPC2Q9UJX6 822 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 AP1G2O75843 785 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 HOXC6P09630 235 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 ALOX5P09917 674 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 CYP2C18P33260 490 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 CSHL1Q14406 222 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 GJC2Q5T442 439 aaPredicted RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 WDR59Q6PJI9 974 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 ZDHHC15Q96MV8 337 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 TAAR1Q96RJ0 339 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 DPY30Q9C005 99 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 DHX33Q9H6R0 707 aaKnown RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 WDR41Q9HAD4 459 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 SF3B1O75533 1304 aaKnown RBP eCLIP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 INPP4BO15327 924 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 DCXO43602 365 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 JCHAINP01591 159 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 HOXD10P28358 340 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 MAGEA10P43363 369 aaPredicted RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 TRAF3Q13114 568 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 TRIQKQ629K1 86 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 EPS8L1Q8TE68 723 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 ZNF512Q96ME7 567 aaPredicted RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 CLEC4MQ9H2X3 399 aaPredicted RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 E2F8A0AVK6 867 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 RBAK-RBAKDNI3L0D1 243 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 TRAFD1O14545 582 aaPredicted RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 PEX1O43933 1283 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 EDF1O60869 148 aaKnown RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 ITGAVP06756 1048 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 PBX1P40424 430 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 PPP3CCP48454 512 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 CSE1LP55060 971 aaKnown RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 DPYSL3Q14195 570 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 NR6A1Q15406 480 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 BROXQ5VW32 411 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 RIPOR1Q6ZS17 1223 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 TTC30AQ86WT1 665 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 C8orf59Q8N0T1 100 aaPredicted RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 FAM81AQ8TBF8 368 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 BLOC1S5Q8TDH9 187 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 ADGRE3Q9BY15 652 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 ELOVL6Q9H5J4 265 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 ZC3H13Q5T200 1668 aaKnown RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 SOAT1P35610 550 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 GLRBP48167 497 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 PDK3Q15120 406 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 FUT11Q495W5 492 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 TMC7Q7Z402 723 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 BAP1Q92560 729 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 MTMR9Q96QG7 549 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 KIAA1683Q9H0B3 1180 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 DDX18Q9NVP1 670 aaKnown RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 UBAP1Q9NZ09 502 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 DNPEPQ9ULA0 475 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 BAIAP3O94812 1187 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 ATG7O95352 703 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 ERBB2P04626 1255 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 MARSP56192 900 aaKnown RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 ZNF177Q13360 481 aaPredicted RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 NFE2Q16621 373 aaPredicted RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 FAM126BQ8IXS8 530 aa10.98□□□□□ -0.65
SEC22B-201ENST00000578049 PRCCQ92733 491 aaPredicted RBP10.98□□□□□ -0.65
SEC22B-201ENST00000578049 FAM25AB3EWG3 89 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 FAM25CB3EWG5 89 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 FAM25GB3EWG6 89 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 TCF7P36402 384 aaPredicted RBP10.97□□□□□ -0.65
SEC22B-201ENST00000578049 BNC1Q01954 994 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 TLK2Q86UE8 772 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 STK32CQ86UX6 486 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 FAM45AQ8TCE6 357 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 OTUD5Q96G74 571 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 CCNB1IP1Q9NPC3 277 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 ATXN10Q9UBB4 475 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 TNPO3Q9Y5L0 923 aaKnown RBP10.97□□□□□ -0.65
SEC22B-201ENST00000578049 TRIM38O00635 465 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 FAM20BO75063 409 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 STX11O75558 287 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 NEK3P51956 506 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 ATP1A4Q13733 1029 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 SGO1Q5FBB7 561 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 ULK2Q8IYT8 1036 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 OR8H2Q8N162 312 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 FBXO39Q8N4B4 442 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 PRELID2Q8N945 189 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 TIMMDC1Q9NPL8 285 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 TAS2R13Q9NYV9 303 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 CRNNQ9UBG3 495 aaPredicted RBP10.97□□□□□ -0.65
SEC22B-201ENST00000578049 C3orf18Q9UK00 162 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 EFR3BQ9Y2G0 817 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 UBE2Q2LH0YL09 131 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 H3BNX3 289 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms