RNA–Protein interactions for RNA: ENST00000577978.1

DDX42-205, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-205ENST00000577978 CABS1Q96KC9 395 aa3.96□□□□□ -1.78
DDX42-205ENST00000577978 SH3GL3Q99963 347 aa3.96□□□□□ -1.78
DDX42-205ENST00000577978 PAIP2Q9BPZ3 127 aaKnown RBP3.96□□□□□ -1.78
DDX42-205ENST00000577978 PARD6BQ9BYG5 372 aa3.96□□□□□ -1.78
DDX42-205ENST00000577978 TM6SF1Q9BZW5 370 aa3.96□□□□□ -1.78
DDX42-205ENST00000577978 AMBRA1Q9C0C7 1298 aa3.96□□□□□ -1.78
DDX42-205ENST00000577978 GBA2Q9HCG7 927 aaPredicted RBP3.96□□□□□ -1.78
DDX42-205ENST00000577978 PDRG1Q9NUG6 133 aa3.96□□□□□ -1.78
DDX42-205ENST00000577978 VPS18Q9P253 973 aa3.96□□□□□ -1.78
DDX42-205ENST00000577978 L1RE1Q9UN81 338 aa3.96□□□□□ -1.78
DDX42-205ENST00000577978 SMC3Q9UQE7 1217 aa3.96□□□□□ -1.78
DDX42-205ENST00000577978 SSC5DA1L4H1 1573 aa3.96□□□□□ -1.78
DDX42-205ENST00000577978 TPRP12270 2363 aaKnown RBP3.96□□□□□ -1.78
DDX42-205ENST00000577978 DCHS1Q96JQ0 3298 aa3.96□□□□□ -1.78
DDX42-205ENST00000577978 SLX4Q8IY92 1834 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 CARMIL3Q8ND23 1372 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 LRRC14BA6NHZ5 514 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 SRRM3A6NNA2 597 aaPredicted RBP3.95□□□□□ -1.78
DDX42-205ENST00000577978 ZSCAN12O43309 604 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 COQ9O75208 318 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 NR2F6P10588 404 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 FOSL2P15408 326 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 ZFXP17010 805 aaPredicted RBP3.95□□□□□ -1.78
DDX42-205ENST00000577978 ITGALP20701 1170 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 PDCP20941 246 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 SCP2P22307 547 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 SFPQP23246 707 aaKnown RBP eCLIP3.95□□□□□ -1.78
DDX42-205ENST00000577978 CCND1P24385 295 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 CERS1P27544 350 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 EPS15P42566 896 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 FNTAP49354 379 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 MTHFSP49914 203 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 ZNF135P52742 658 aaPredicted RBP3.95□□□□□ -1.78
DDX42-205ENST00000577978 HK3P52790 923 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 PDE1AP54750 535 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 DRP2Q13474 957 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 BMPR2Q13873 1038 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 PDCD2Q16342 344 aaPredicted RBP3.95□□□□□ -1.78
DDX42-205ENST00000577978 SLC9C1Q4G0N8 1177 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 AP1ARQ63HQ0 302 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 TAF2Q6P1X5 1199 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 CEP85Q6P2H3 762 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 SLC30A10Q6XR72 485 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 ZNF551Q7Z340 670 aaPredicted RBP3.95□□□□□ -1.78
DDX42-205ENST00000577978 UBE2Q1Q7Z7E8 422 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 CCDC50Q8IVM0 306 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 DHX40Q8IX18 779 aaKnown RBP3.95□□□□□ -1.78
DDX42-205ENST00000577978 FAM109AQ8N4B1 249 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 PRR18Q8N4B5 295 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 CAMKK1Q8N5S9 505 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 CEP112Q8N8E3 955 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 MAB21L3Q8N8X9 362 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 CNNM3Q8NE01 707 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 CCDC26Q8TAB7 109 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 ZCRB1Q8TBF4 217 aaKnown RBP3.95□□□□□ -1.78
DDX42-205ENST00000577978 CDX2Q99626 313 aaPredicted RBP3.95□□□□□ -1.78
DDX42-205ENST00000577978 CARD6Q9BX69 1037 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 TPSD1Q9BZJ3 242 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 TRIM6Q9C030 488 aaPredicted RBP3.95□□□□□ -1.78
DDX42-205ENST00000577978 TINAGL1Q9GZM7 467 aaPredicted RBP3.95□□□□□ -1.78
DDX42-205ENST00000577978 NAT10Q9H0A0 1025 aaKnown RBP3.95□□□□□ -1.78
DDX42-205ENST00000577978 ALDH8A1Q9H2A2 487 aaPredicted RBP3.95□□□□□ -1.78
DDX42-205ENST00000577978 PDE11AQ9HCR9 933 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 NRIP3Q9NQ35 241 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 BATF3Q9NR55 127 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 HOMER3Q9NSC5 361 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 ANO10Q9NW15 660 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 TRMT1Q9NXH9 659 aaKnown RBP3.95□□□□□ -1.78
DDX42-205ENST00000577978 DACT1Q9NYF0 836 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 GGA2Q9UJY4 613 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 FAM208BQ5VWN6 2430 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 ALPK3Q96L96 1907 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 SOS1Q07889 1333 aaPredicted RBP3.95□□□□□ -1.78
DDX42-205ENST00000577978 MAP3K19Q56UN5 1328 aa3.95□□□□□ -1.78
DDX42-205ENST00000577978 CD163L1Q9NR16 1453 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 A0A1B0GUA9 196 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 TARM1B6A8C7 271 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 EBAG9O00559 213 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 MPHOSPH10O00566 681 aaKnown RBP3.94□□□□□ -1.78
DDX42-205ENST00000577978 IKBKBO14920 756 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 NPHP1O15259 732 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 HMMRO75330 724 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 HNRNPCP07910 306 aaKnown RBP eCLIP3.94□□□□□ -1.78
DDX42-205ENST00000577978 RHOP08100 348 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 EBLN1P0CF75 366 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 PRR35P0CG20 571 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 U2AF1L5P0DN76 240 aaPredicted RBP3.94□□□□□ -1.78
DDX42-205ENST00000577978 KELP23276 732 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 MCM3P25205 808 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 GJB2P29033 226 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 NF2P35240 595 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 RDXP35241 583 aaKnown RBP3.94□□□□□ -1.78
DDX42-205ENST00000577978 PRPHP41219 470 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 ARHGAP25P42331 645 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 AMPHP49418 695 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 TUBA4AP68366 448 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 U2AF1Q01081 240 aaKnown RBP eCLIP3.94□□□□□ -1.789e-12■■■□□ 17.2
DDX42-205ENST00000577978 TFF2Q03403 129 aa3.94□□□□□ -1.78
DDX42-205ENST00000577978 MTA1Q13330 715 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms