RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 SP8Q8IXZ3 490 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 NIPA2Q8N8Q9 360 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 BCAS4Q8TDM0 211 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 WDR60Q8WVS4 1066 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 THRSPQ92748 146 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 CORO2AQ92828 525 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 HPS1Q92902 700 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 DTNBP1Q96EV8 351 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 C8orf76Q96K31 380 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 TCEANC2Q96MN5 208 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 FIZ1Q96SL8 496 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 TUBA1CQ9BQE3 449 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 FERMT1Q9BQL6 677 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 ERP44Q9BS26 406 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 SLC25A23Q9BV35 468 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 PHF7Q9BWX1 381 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 CARD11Q9BXL7 1154 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 TINAGL1Q9GZM7 467 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 PCED1AQ9H1Q7 454 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 ATXN3LQ9H3M9 355 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 RIBC2Q9H4K1 309 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 TMLHEQ9NVH6 421 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 UCKL1Q9NWZ5 548 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 GALNT8Q9NY28 637 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 KCND2Q9NZV8 630 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 FRRS1LQ9P0K9 344 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 ARHGAP20Q9P2F6 1191 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 FBXL7Q9UJT9 491 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 MID2Q9UJV3 735 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 ANAPC2Q9UJX6 822 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 DSEQ9UL01 958 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 SNX14Q9Y5W7 946 aa5.24□□□□□ -1.57
TOPBP1-210ENST00000572787 SALL3Q9BXA9 1300 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 XKRY2A2RUG3 117 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 EME2A4GXA9 379 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 FAM90A18PA6NE21 464 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 FAM90A16PA6NEW6 464 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 GAGE10A6NGK3 116 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 WTIPA6NIX2 430 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 FAM170BA6NMN3 283 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 FAM90A9PA6NNJ1 464 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 TBKBP1A7MCY6 615 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 FAM90A5PA8MXJ8 464 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 KPNA7A9QM74 516 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 GCOM1H8Y6P7 765 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 PEX12O00623 359 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 RASGRF2O14827 1237 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 SEPT4O43236 478 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 FOXD2O60548 495 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 CYTIPO60759 359 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 ZNF254O75437 659 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 SPAG6O75602 509 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 RASSF9O75901 435 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 ALDH1A2O94788 518 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 HMGCRP04035 888 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 FAM90A15PP0C7V4 464 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 FAM90A14PP0C7W9 464 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 ALADP13716 330 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 SYN1P17600 705 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 TCEA1P23193 301 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 TNFRSF8P28908 595 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 CDC25BP30305 580 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 MCM5P33992 734 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 MSX2P35548 267 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 CTSKP43235 329 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 CCR10P46092 362 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 PITPNBP48739 271 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 KHKP50053 298 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 STAT2P52630 851 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 EIF3BP55884 814 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 KIAA1024LP59773 190 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 ARHGAP8P85298 464 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 ACY1Q03154 408 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 SPAG1Q07617 926 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 KCNMA1Q12791 1236 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 TARDBPQ13148 414 aaKnown RBP eCLIP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 CTBP1Q13363 440 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 ARHGEF6Q15052 776 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 RPS6KA1Q15418 735 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 CNGA3Q16281 694 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 DGKDQ16760 1214 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 HYAL4Q2M3T9 481 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 PREPLQ4J6C6 727 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 HS1BP3Q53T59 392 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 FBXO48Q5FWF7 155 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 RNFT1Q5M7Z0 435 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 SPDYAQ5MJ70 313 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 METTL11BQ5VVY1 283 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 MBLAC2Q68D91 279 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 GDF6Q6KF10 455 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 LETMD1Q6P1Q0 360 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 KLC3Q6P597 504 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 CRTC3Q6UUV7 619 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 CRELD2Q6UXH1 353 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 LRIG3Q6UXM1 1119 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 B3GNT6Q6ZMB0 384 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 RBM43Q6ZSC3 357 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 CCDC80Q76M96 950 aa5.23□□□□□ -1.57
TOPBP1-210ENST00000572787 ADCK2Q7Z695 626 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms