RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 GANCQ8TET4 914 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 DNAJB3Q8WWF6 145 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 VCPIP1Q96JH7 1222 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 ZC3H10Q96K80 434 aaKnown RBP6.87□□□□□ -1.31
SMG1-217ENST00000569764 MTMR10Q9NXD2 777 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 MAN1B1Q9UKM7 699 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 GRID1Q9ULK0 1009 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 PLIN4Q96Q06 1357 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 AREL1O15033 823 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 STAT6P42226 847 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 RECQLP46063 649 aaPredicted RBP6.87□□□□□ -1.31
SMG1-217ENST00000569764 KARSQ15046 597 aaKnown RBP6.87□□□□□ -1.31
SMG1-217ENST00000569764 SNCBQ16143 134 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 FYB2Q5VWT5 728 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 SESTD1Q86VW0 696 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 HDDC3Q8N4P3 179 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 RDH13Q8NBN7 331 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 FAM156AQ8NDB6 213 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 SPATA20Q8TB22 786 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 NKD2Q969F2 451 aaPredicted RBP6.87□□□□□ -1.31
SMG1-217ENST00000569764 KLHL5Q96PQ7 755 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 SLITRK1Q96PX8 696 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 JMJD4Q9H9V9 463 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 BAIAP2L1Q9UHR4 511 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 UMODL1Q5DID0 1318 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 OPLAHO14841 1288 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 TTI1O43156 1089 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 RNASEH1O60930 286 aaKnown RBP6.87□□□□□ -1.31
SMG1-217ENST00000569764 FBXO24O75426 580 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 HNRNPA1P09651 372 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMG1-217ENST00000569764 RALAP11233 206 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 HPGDP15428 266 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 EIF1AXP47813 144 aaKnown RBP6.87□□□□□ -1.31
SMG1-217ENST00000569764 DSC3Q14574 896 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 PGM5Q15124 567 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 PHC2Q8IXK0 858 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 IRF7Q92985 503 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 BLZF1Q9H2G9 400 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 RIOX1Q9H6W3 641 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMG1-217ENST00000569764 TBC1D14Q9P2M4 693 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 SUSD2Q9UGT4 822 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 UBQLN1Q9UMX0 589 aaKnown RBP6.87□□□□□ -1.31
SMG1-217ENST00000569764 APOBEC2Q9Y235 224 aaKnown RBP6.87□□□□□ -1.31
SMG1-217ENST00000569764 ASB3Q9Y575 518 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 CAPN8A6NHC0 703 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 MYMKA6NI61 221 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 PRR5-ARHGAP8B1AHC4 643 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 SLC25A17O43808 307 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 ADAMTS4O75173 837 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 USP1O94782 785 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 GJB5O95377 273 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 CA3P07451 260 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 PNMA6AP0CW24 399 aaPredicted RBP6.87□□□□□ -1.31
SMG1-217ENST00000569764 FGFR1P11362 822 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 ODC1P11926 461 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 COL9A1P20849 921 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 EIF4A3P38919 411 aaKnown RBP6.87□□□□□ -1.31
SMG1-217ENST00000569764 AFMP43652 599 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 CASP5P51878 434 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 ARHGAP8P85298 464 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 CDK17Q00537 523 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 LIPEQ05469 1076 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 SCARB2Q14108 478 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 DAB2IPQ5VWQ8 1189 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 XKR5Q6UX68 686 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 DLK2Q6UY11 383 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 VPS36Q86VN1 386 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 ARHGAP18Q8N392 663 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 ADAD1Q96M93 576 aaKnown RBP6.87□□□□□ -1.31
SMG1-217ENST00000569764 CCSER1Q9C0I3 900 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 NTN4Q9HB63 628 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 SESN1Q9Y6P5 492 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 USP27XA6NNY8 438 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 A6NNZ2 444 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 SPATA31C2B4DYI2 1134 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 H7C0S8 307 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 GOLGA8RI6L899 631 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 CLDN3O15551 220 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 ATP8B1O43520 1251 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 NPTXRO95502 500 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 PRKACAP17612 351 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 OXCT1P55809 520 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 UBE2SQ16763 222 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 ZNF568Q3ZCX4 644 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 ANKRD20A4Q4UJ75 823 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 ANKRD20A8PQ5CZ79 823 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 ANKRD20A2Q5SQ80 823 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 TMEM240Q5SV17 173 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 ANKRD20A1Q5TYW2 823 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 ANKRD20A3Q5VUR7 823 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 RNF135Q8IUD6 432 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 IQUBQ8NA54 791 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 OR6P1Q8NGX9 317 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 NSMCE1Q8WV22 266 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 CABS1Q96KC9 395 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 TXLNGYQ9BZA5 131 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 ZMYND12Q9H0C1 365 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 SAP130Q9H0E3 1048 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 CUEDC2Q9H467 287 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms