RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	RNF19A	Q9NV58	838 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	GJD2	Q9UKL4	321 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	COL1A2	P08123	1366 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	ASB14	A6NK59	587 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	PRR5-ARHGAP8	B1AHC4	643 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507		F8W8V4	182 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	NEBL	O76041	1014 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	UPP2	O95045	317 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	ATP5B	P06576	529 aa	Known RBP	13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	SERPINA6	P08185	405 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	MLN	P12872	115 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	GOT1	P17174	413 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	DES	P17661	470 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	TUB	P50607	506 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	ZNF157	P51786	506 aa	Predicted RBP	13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	SNX16	P57768	344 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	CCNA1	P78396	465 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	CRADD	P78560	199 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	MRPS35	P82673	323 aa	Known RBP	13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	ARHGAP8	P85298	464 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	KDSR	Q06136	332 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	TUBB3	Q13509	450 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	GRB14	Q14449	540 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	MBLAC2	Q68D91	279 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	UNC93A	Q86WB7	457 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	ARHGAP24	Q8N264	748 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	PPTC7	Q8NI37	304 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	FAM161B	Q96MY7	647 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	LGMN	Q99538	433 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	PLEKHA5	Q9HAU0	1116 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	SNTG2	Q9NY99	539 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	MORF4L1	Q9UBU8	362 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	DERA	Q9Y315	318 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	WASF2	Q9Y6W5	498 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507		A0A0A0MRY4	1105 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	ITM2A	O43736	263 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	TM7SF2	O76062	418 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	CCDC130	P13994	396 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	SCNN1A	P37088	669 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	ALDH18A1	P54886	795 aa	Known RBP	13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	DBN1	Q16643	649 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	FASTKD1	Q53R41	847 aa	Known RBP	13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	TEDDM1	Q5T9Z0	273 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	C16orf46	Q6P387	395 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	ATG14	Q6ZNE5	492 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	ANKRD52	Q8NB46	1076 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	OR6B3	Q8NGW1	331 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	ACMSD	Q8TDX5	336 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	C18orf25	Q96B23	403 aa	Predicted RBP	13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	SNX27	Q96L92	541 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	SPATA13	Q96N96	652 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	SYT15	Q9BQS2	421 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	KRT82	Q9NSB4	513 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	ZNF212	Q9UDV6	495 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	GINS2	Q9Y248	185 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	NPTXR	O95502	500 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	PRKCG	P05129	697 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	FGF3	P11487	239 aa	Predicted RBP	13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	IRX4	P78413	519 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	KLC1	Q07866	573 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	AP1B1	Q10567	949 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	BST2	Q10589	180 aa	Known RBP	13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	PDE1C	Q14123	709 aa	Predicted RBP	13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	UBAP2L	Q14157	1087 aa	Known RBP	13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	RCN2	Q14257	317 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	LRRC8B	Q6P9F7	803 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	PACS1	Q6VY07	963 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	RFX8	Q6ZV50	586 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	SCUBE1	Q8IWY4	988 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	LRRC52	Q8N7C0	313 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	TFB1M	Q8WVM0	346 aa	Known RBP	13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	KBTBD7	Q8WVZ9	684 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	STMN2	Q93045	179 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	CLPTM1L	Q96KA5	538 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507	LRCH1	Q9Y2L9	728 aa		13.55	□□□□□ -0.24
SCAPER-215	ENST00000565507		F5H423	210 aa	Predicted RBP	13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	SPECC1L-ADORA2A	F8WAN1	911 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	LYPLA1	O75608	230 aa	Predicted RBP	13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	LCP1	P13796	627 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	CPOX	P36551	454 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	TBCC	Q15814	346 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	NET1	Q7Z628	596 aa	Predicted RBP	13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	KBTBD2	Q8IY47	623 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	ULK2	Q8IYT8	1036 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	CRYBG2	Q8N1P7	616 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	UCMA	Q8WVF2	138 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	PANX3	Q96QZ0	392 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	TINF2	Q9BSI4	451 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	C1orf21	Q9H246	121 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	SLC7A8	Q9UHI5	535 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	PSAT1	Q9Y617	370 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	HACD1	B0YJ81	288 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507		H3BRB1	525 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	TPP1	O14773	563 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	PLIN3	O60664	434 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	AOC1	P19801	751 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	LMO2	P25791	158 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	ADORA2B	P29275	332 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms