RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 USP37Q86T82 979 aa5.31□□□□□ -1.56
SMG1-206ENST00000562668 ANKRD13AQ8IZ07 590 aa5.31□□□□□ -1.56
SMG1-206ENST00000562668 SCYL3Q8IZE3 742 aa5.31□□□□□ -1.56
SMG1-206ENST00000562668 TBC1D5Q92609 795 aa5.31□□□□□ -1.56
SMG1-206ENST00000562668 MAP4K1Q92918 833 aa5.31□□□□□ -1.56
SMG1-206ENST00000562668 ASPSCR1Q9BZE9 553 aa5.31□□□□□ -1.56
SMG1-206ENST00000562668 LMBRD1Q9NUN5 540 aa5.31□□□□□ -1.56
SMG1-206ENST00000562668 MCM9Q9NXL9 1143 aa5.31□□□□□ -1.56
SMG1-206ENST00000562668 PLIN4Q96Q06 1357 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 CTNND1O60716 968 aaKnown RBP5.3□□□□□ -1.56
SMG1-206ENST00000562668 PIM1P11309 404 aaPredicted RBP5.3□□□□□ -1.56
SMG1-206ENST00000562668 JUPP14923 745 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 AKR1B1P15121 316 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 ITGB6P18564 788 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 PDCP20941 246 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 NF2P35240 595 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 NOVP48745 357 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 TMEM240Q5SV17 173 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 FAM160B1Q5W0V3 765 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 ARMC9Q7Z3E5 817 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 TBC1D10CQ8IV04 446 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 PRR18Q8N4B5 295 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 CPA6Q8N4T0 437 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 HOOK2Q96ED9 719 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 FAM167AQ96KS9 214 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 CAPNS2Q96L46 248 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 SEMA4CQ9C0C4 833 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 DIAPH3Q9NSV4 1193 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 HESX1Q9UBX0 185 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 ABT1Q9ULW3 272 aaKnown RBP5.3□□□□□ -1.56
SMG1-206ENST00000562668 SPEF1Q9Y4P9 236 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 AFG3L2Q9Y4W6 797 aa5.3□□□□□ -1.56
SMG1-206ENST00000562668 A0A0G2JMZ2 1700 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 MYH4Q9Y623 1939 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 CEP350Q5VT06 3117 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 A0A1W2PRG0 241 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 H0YIZ8 118 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 PPM1DO15297 605 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 SNUPNO95149 360 aaKnown RBP5.29□□□□□ -1.56
SMG1-206ENST00000562668 LATS1O95835 1130 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 AHSGP02765 367 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 PDHA1P08559 390 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 CYP21A2P08686 494 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 TYRP14679 529 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 TM4SF4P48230 202 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 TDO2P48775 406 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 MAP2K6P52564 334 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 PPATQ06203 517 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 PPIL2Q13356 520 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 BOP1Q14137 746 aaKnown RBP5.29□□□□□ -1.56
SMG1-206ENST00000562668 NECTIN1Q15223 517 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 MTX3Q5HYI7 312 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 ZNF425Q6IV72 752 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 ANKRD16Q6P6B7 361 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 TMEM108Q6UXF1 575 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 STOX1Q6ZVD7 989 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 USP45Q70EL2 814 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 SLC29A4Q7RTT9 530 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 MAVSQ7Z434 540 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 PPP1R3BQ86XI6 285 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 ERO1BQ86YB8 467 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 FAM46DQ8NEK8 389 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 OPTNQ96CV9 577 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 REPS1Q96D71 796 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 NELL2Q99435 816 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 NAPBQ9H115 298 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 SH3BP4Q9P0V3 963 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 SWAP70Q9UH65 585 aa5.29□□□□□ -1.56
SMG1-206ENST00000562668 NEDD4P46934 1319 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 PCNTO95613 3336 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 ZNF213O14771 459 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 SLC16A3O15427 465 aaKnown RBP5.28□□□□□ -1.56
SMG1-206ENST00000562668 TLR5O60602 858 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 PRDM1O75626 825 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 JTBO76095 146 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 GH2P01242 217 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 PRR35P0CG20 571 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 EPHB2P29323 1055 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 MAP2K2P36507 400 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 CLCN2P51788 898 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 ZNF134P52741 427 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 LOXL3P58215 753 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 HAND2P61296 217 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 SSBP2P81877 361 aaPredicted RBP5.28□□□□□ -1.56
SMG1-206ENST00000562668 CERKLQ49MI3 558 aaPredicted RBP5.28□□□□□ -1.56
SMG1-206ENST00000562668 AARS2Q5JTZ9 985 aaKnown RBP5.28□□□□□ -1.56
SMG1-206ENST00000562668 KIAA1755Q5JYT7 1200 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 ZNF626Q68DY1 528 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 SFRP4Q6FHJ7 346 aaPredicted RBP5.28□□□□□ -1.56
SMG1-206ENST00000562668 DTX2Q86UW9 622 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 BRIX1Q8TDN6 353 aaKnown RBP5.28□□□□□ -1.56
SMG1-206ENST00000562668 ACER1Q8TDN7 264 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 STAG1Q8WVM7 1258 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 RUFY2Q8WXA3 655 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 BRI3BPQ8WY22 251 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 SLC46A1Q96NT5 459 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 NACAP1Q9BZK3 213 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 ZHX2Q9Y6X8 837 aa5.28□□□□□ -1.56
SMG1-206ENST00000562668 ZSWIM8A7E2V4 1837 aa5.27□□□□□ -1.57
SMG1-206ENST00000562668 KRTAP29-1A8MX34 341 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms