RNA–Protein interactions for RNA: ENST00000558554.5

IDH3A-207, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2 BASIC

Gene IDH3A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-207ENST00000558554 PRICKLE1Q96MT3 831 aaPredicted RBP13.05□□□□□ -0.32
IDH3A-207ENST00000558554 NAP1L5Q96NT1 182 aaPredicted RBP13.05□□□□□ -0.32
IDH3A-207ENST00000558554 ERGIC2Q96RQ1 377 aa13.05□□□□□ -0.32
IDH3A-207ENST00000558554 POLMQ9NP87 494 aaPredicted RBP13.05□□□□□ -0.32
IDH3A-207ENST00000558554 ABCB8Q9NUT2 735 aa13.05□□□□□ -0.32
IDH3A-207ENST00000558554 NOCTQ9UK39 431 aaKnown RBP13.05□□□□□ -0.32
IDH3A-207ENST00000558554 GMEB2Q9UKD1 530 aa13.05□□□□□ -0.32
IDH3A-207ENST00000558554 MUC22E2RYF6 1773 aaPredicted RBP13.04□□□□□ -0.32
IDH3A-207ENST00000558554 ALDH1A2O94788 518 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 IGLV3-27P01718 113 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 ABCB4P21439 1286 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 NTSR1P30989 418 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 CDR2Q01850 454 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 IQCB1Q15051 598 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 FNDC3BQ53EP0 1204 aaKnown RBP13.04□□□□□ -0.32
IDH3A-207ENST00000558554 TRMT11Q7Z4G4 463 aaKnown RBP13.04□□□□□ -0.32
IDH3A-207ENST00000558554 WDR5BQ86VZ2 330 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 XYLT1Q86Y38 959 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 CCDC117Q8IWD4 279 aaPredicted RBP13.04□□□□□ -0.32
IDH3A-207ENST00000558554 EMC1Q8N766 993 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 ZNF366Q8N895 744 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 ATP6V0D2Q8N8Y2 350 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 CFAP57Q96MR6 1250 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 SIK2Q9H0K1 926 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
IDH3A-207ENST00000558554 USP18Q9UMW8 372 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 ADAMTS9Q9P2N4 1935 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 ABCA7Q8IZY2 2146 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 SDK1Q7Z5N4 2213 aa13.04□□□□□ -0.32
IDH3A-207ENST00000558554 LRRC53A6NM62 1247 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 F5H5T6 163 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 LILRB5O75023 590 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 PAPSS2O95340 614 aaPredicted RBP13.03□□□□□ -0.32
IDH3A-207ENST00000558554 LSM8O95777 96 aaKnown RBP13.03□□□□□ -0.32
IDH3A-207ENST00000558554 CISD3P0C7P0 127 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 CHRNB2P17787 502 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 TACR2P21452 398 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 ATXN1P54253 815 aaKnown RBP13.03□□□□□ -0.32
IDH3A-207ENST00000558554 ATP11AP98196 1134 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 RING1Q06587 406 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 SPEM2Q0P670 501 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 CDH18Q13634 790 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 PIK3R6Q5UE93 754 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 KIAA1211LQ6NV74 962 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 KIAA1324Q6UXG2 1013 aaKnown RBP13.03□□□□□ -0.32
IDH3A-207ENST00000558554 CHST9Q7L1S5 443 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 ARMCX6Q7L4S7 300 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 KBTBD6Q86V97 674 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 FAM160A2Q8N612 972 aaPredicted RBP13.03□□□□□ -0.32
IDH3A-207ENST00000558554 DEFB119Q8N690 84 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 FRMD1Q8N878 549 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 SUMF1Q8NBK3 374 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 HJURPQ8NCD3 748 aaPredicted RBP13.03□□□□□ -0.32
IDH3A-207ENST00000558554 RNF214Q8ND24 703 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 UCMAQ8WVF2 138 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 SLC2A13Q96QE2 648 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 TBCBQ99426 244 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 DDX50Q9BQ39 737 aaKnown RBP13.03□□□□□ -0.32
IDH3A-207ENST00000558554 EPC1Q9H2F5 836 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.03□□□□□ -0.32
IDH3A-207ENST00000558554 SLC12A6Q9UHW9 1150 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 SNX10Q9Y5X0 201 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 CKAP5Q14008 2032 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 H0Y626 953 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 HLA-EP13747 358 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 HLA-FP30511 346 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 CCR1P32246 355 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 CD70P32970 193 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 NSFP46459 744 aaKnown RBP13.03□□□□□ -0.32
IDH3A-207ENST00000558554 FANCCQ00597 558 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 CENPCQ03188 943 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 DEUP1Q05D60 604 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 ASIC2Q16515 512 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 SKOR2Q2VWA4 1001 aaPredicted RBP13.03□□□□□ -0.32
IDH3A-207ENST00000558554 MAMSTRQ6ZN01 415 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 SND1Q7KZF4 910 aaKnown RBP eCLIP13.03□□□□□ -0.32
IDH3A-207ENST00000558554 DNAAF5Q86Y56 855 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 FAM217AQ8IXS0 508 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 CAMKK1Q8N5S9 505 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 CPLX3Q8WVH0 158 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 GAB3Q8WWW8 586 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 RUBCNQ92622 972 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 NELL1Q92832 810 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 PCDHB18PQ96TA0 734 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 SEMA4AQ9H3S1 761 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 TMPRSS4Q9NRS4 437 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 CALCOCO1Q9P1Z2 691 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 GGA2Q9UJY4 613 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 HCN2Q9UL51 889 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 VANGL2Q9ULK5 521 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 STAP1Q9ULZ2 295 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 STON1Q9Y6Q2 735 aa13.03□□□□□ -0.32
IDH3A-207ENST00000558554 TNRC6BQ9UPQ9 1833 aaKnown RBP13.02□□□□□ -0.32
IDH3A-207ENST00000558554 PLXND1Q9Y4D7 1925 aa13.02□□□□□ -0.32
IDH3A-207ENST00000558554 DOCK4Q8N1I0 1966 aa13.02□□□□□ -0.32
IDH3A-207ENST00000558554 ZBTB24O43167 697 aaPredicted RBP13.02□□□□□ -0.33
IDH3A-207ENST00000558554 MAP3K13O43283 966 aa13.02□□□□□ -0.33
IDH3A-207ENST00000558554 LATS1O95835 1130 aa13.02□□□□□ -0.33
IDH3A-207ENST00000558554 GLI1P08151 1106 aa13.02□□□□□ -0.33
IDH3A-207ENST00000558554 PABPC1P11940 636 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms