RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 GJB3O75712 270 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 FTH1P19P0C7X4 201 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 PAMP19021 973 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 BCKDHBP21953 392 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 ARL2P36404 184 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 P2RY2P41231 377 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 PTGER3P43115 390 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 CLCNKBP51801 687 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 ARPP19P56211 112 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 CYP4A11Q02928 519 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 HDAC1Q13547 482 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-223ENST00000557076 PFKFB3Q16875 520 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-223ENST00000557076 FAM187BQ17R55 369 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 PLA2G4FQ68DD2 849 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 GAREM2Q75VX8 874 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 RABEPKQ7Z6M1 372 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 DNAJB7Q7Z6W7 309 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-223ENST00000557076 C4orf19Q8IY42 314 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 LINC00482Q8N8I6 264 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 PNPLA1Q8N8W4 532 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 ADCY4Q8NFM4 1077 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 TSTD1Q8NFU3 115 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 BICD2Q8TD16 824 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 ADAMTS17Q8TE56 1095 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 USP33Q8TEY7 942 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 CCDC12Q8WUD4 166 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-223ENST00000557076 RUFY2Q8WXA3 655 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 GJA10Q969M2 543 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 WBP1Q96G27 269 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 CNOT6LQ96LI5 555 aaKnown RBP5.14□□□□□ -1.59
SCFD1-223ENST00000557076 NOX5Q96PH1 765 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 PPP1R10Q96QC0 940 aaKnown RBP5.14□□□□□ -1.59
SCFD1-223ENST00000557076 FNBP1Q96RU3 617 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 RBM15Q96T37 977 aaKnown RBP eCLIP5.14□□□□□ -1.59
SCFD1-223ENST00000557076 P2RY13Q9BPV8 354 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 KLHL25Q9H0H3 589 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 TASP1Q9H6P5 420 aa5.14□□□□□ -1.59
SCFD1-223ENST00000557076 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.14□□□□□ -1.595e-7■■■□□ 17.9
SCFD1-223ENST00000557076 SHROOM3Q8TF72 1996 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 UBR5O95071 2799 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-223ENST00000557076 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 E9PAM4 449 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 ADAMTS3O15072 1205 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 B4GALT5O43286 388 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 CBFA2T3O75081 653 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 CFIP05156 583 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 TNFRSF1AP19438 455 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 RPL9P32969 192 aaKnown RBP5.13□□□□□ -1.59
SCFD1-223ENST00000557076 ABCG1P45844 678 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 ALDH1A3P47895 512 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 MCM2P49736 904 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 CFHR1Q03591 330 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 PPP2R5CQ13362 524 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 PLD1Q13393 1074 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 EMC2Q15006 297 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 CRY1Q16526 586 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 CTXN3Q4LDR2 81 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 ARHGAP15Q53QZ3 475 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 CPZQ66K79 652 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 LMBRD2Q68DH5 695 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-223ENST00000557076 ALKAL1Q6UXT8 129 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 ADAT2Q7Z6V5 191 aaKnown RBP5.13□□□□□ -1.59
SCFD1-223ENST00000557076 CDR2LQ86X02 465 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-223ENST00000557076 DCP2Q8IU60 420 aaKnown RBP5.13□□□□□ -1.59
SCFD1-223ENST00000557076 TMC8Q8IU68 726 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 GALNT15Q8N3T1 639 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 MINDY1Q8N5J2 469 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 C19orf47Q8N9M1 422 aaKnown RBP5.13□□□□□ -1.59
SCFD1-223ENST00000557076 APPL2Q8NEU8 664 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 RPLP0P6Q8NHW5 317 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 ETNPPLQ8TBG4 499 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 RCC1LQ96I51 464 aaKnown RBP5.13□□□□□ -1.59
SCFD1-223ENST00000557076 SPATA32Q96LK8 384 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 CAMK1GQ96NX5 476 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 MCMBPQ9BTE3 642 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 PI4K2AQ9BTU6 479 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 GTPBP2Q9BX10 602 aaKnown RBP5.13□□□□□ -1.59
SCFD1-223ENST00000557076 C1QTNF3Q9BXJ4 246 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 SLC46A2Q9BY10 475 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 CXCL16Q9H2A7 254 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 FZD8Q9H461 694 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 EBF3Q9H4W6 596 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 HPS4Q9NQG7 708 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 FBLN5Q9UBX5 448 aa5.13□□□□□ -1.59
SCFD1-223ENST00000557076 TEP1Q99973 2627 aaKnown RBP5.12□□□□□ -1.59
SCFD1-223ENST00000557076 MYO9AB2RTY4 2548 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 NPHP3-ACAD11A0A0J9YXS1 232 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 SMIM28A0A1B0GU29 152 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 C1QTNF3-AMACRE9PGA6 284 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 I3L4J1 428 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 TBX3O15119 743 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 NPHS1O60500 1241 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 RECQL4O94761 1208 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 ALDH1A2O94788 518 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 OAZ2O95190 189 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 PRAMEF12O95522 483 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 PLATP00750 562 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 YWHABP31946 246 aaKnown RBP5.12□□□□□ -1.59
SCFD1-223ENST00000557076 GJA4P35212 333 aa5.12□□□□□ -1.59
SCFD1-223ENST00000557076 EIF2S3P41091 472 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms