RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 FBXO15Q8NCQ5 510 aaPredicted RBP6.4□□□□□ -1.38
CPSF2-205ENST00000556622 DNERQ8NFT8 737 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 CYP2W1Q8TAV3 490 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 DEPTORQ8TB45 409 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 FBXO25Q8TCJ0 367 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 DIS3LQ8TF46 1054 aaKnown RBP6.4□□□□□ -1.38
CPSF2-205ENST00000556622 CLEC4DQ8WXI8 215 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 CD101Q93033 1021 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 RELTQ969Z4 430 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 KIRREL1Q96J84 757 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 FAM167AQ96KS9 214 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 MYCBPQ99417 103 aaPredicted RBP6.4□□□□□ -1.38
CPSF2-205ENST00000556622 TRIM31Q9BZY9 425 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 GPR88Q9GZN0 384 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 C2orf40Q9H1Z8 148 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 CCSER2Q9H7U1 834 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 SP110Q9HB58 689 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 SPC25Q9HBM1 224 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 XPNPEP3Q9NQH7 507 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 TXLNGQ9NUQ3 528 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 GEMIN8Q9NWZ8 242 aaKnown RBP6.4□□□□□ -1.38
CPSF2-205ENST00000556622 SMARCAL1Q9NZC9 954 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 SLC24A2Q9UI40 661 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 ANAPC7Q9UJX3 599 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 NOCTQ9UK39 431 aaKnown RBP6.4□□□□□ -1.38
CPSF2-205ENST00000556622 SNX24Q9Y343 169 aa6.4□□□□□ -1.38
CPSF2-205ENST00000556622 USP15Q9Y4E8 981 aaPredicted RBP6.4□□□□□ -1.38
CPSF2-205ENST00000556622 PLXNA1Q9UIW2 1896 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 LOC102724159A0A0B4J2E5 919 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 ZSCAN5CA6NGD5 496 aaPredicted RBP6.39□□□□□ -1.39
CPSF2-205ENST00000556622 E7ENQ6 273 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 K7ERI5 159 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 SLC16A4O15374 487 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 PROSCO94903 275 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 LUC7L3O95232 432 aaKnown RBP6.39□□□□□ -1.39
CPSF2-205ENST00000556622 PGK1P00558 417 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 PIGRP01833 764 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 TGFB3P10600 412 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 ITGA4P13612 1032 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 PTPN7P35236 360 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 ADCYAP1R1P41586 468 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 NPTX2P47972 431 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 KRTAP10-2P60368 255 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 RPS6P62753 249 aaKnown RBP6.39□□□□□ -1.39
CPSF2-205ENST00000556622 TNFAIP2Q03169 654 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 KRT17Q04695 432 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 SPARCL1Q14515 664 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 MXD4Q14582 209 aaPredicted RBP6.39□□□□□ -1.39
CPSF2-205ENST00000556622 MORF4L2Q15014 288 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 PGM5Q15124 567 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 PWP2Q15269 919 aaKnown RBP6.39□□□□□ -1.39
CPSF2-205ENST00000556622 NR0B2Q15466 257 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 SGSM1Q2NKQ1 1148 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 KLHL38Q2WGJ6 581 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 ANKRD20A8PQ5CZ79 823 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 ZPBP2Q6X784 338 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 RNF111Q6ZNA4 994 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 ATG14Q6ZNE5 492 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 TRPM8Q7Z2W7 1104 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 POLNQ7Z5Q5 900 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 ANKS1BQ7Z6G8 1248 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 UBE2Q1Q7Z7E8 422 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 TDRPQ86YL5 185 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 C7orf61Q8IZ16 206 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 MCOLN2Q8IZK6 566 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 CCDC63Q8NA47 563 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 SLC43A3Q8NBI5 491 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 TMEM35BQ8NCS4 154 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 TMEM161BQ8NDZ6 487 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 ZNF398Q8TD17 642 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 LINC01599Q8WXQ3 324 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 CCT6BQ92526 530 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 ARHGEF2Q92974 986 aaKnown RBP6.39□□□□□ -1.39
CPSF2-205ENST00000556622 CCDC127Q96BQ5 260 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 MAGEB18Q96M61 343 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 TAAR1Q96RJ0 339 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 SMC6Q96SB8 1091 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 FERMT1Q9BQL6 677 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 PDCD2LQ9BRP1 358 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 CCDC113Q9H0I3 377 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 AP5M1Q9H0R1 490 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 PCIF1Q9H4Z3 704 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 PRDM16Q9HAZ2 1276 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 PXMP2Q9NR77 195 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 ADAM22Q9P0K1 906 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 SLC9A2Q9UBY0 812 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 LGALS13Q9UHV8 139 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 KIAA1257Q9ULG3 409 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 PCDHA11Q9Y5I1 949 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 STYXL1Q9Y6J8 313 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 CENPFP49454 3210 aa6.39□□□□□ -1.39
CPSF2-205ENST00000556622 A0A1W2PQH9 124 aa6.38□□□□□ -1.39
CPSF2-205ENST00000556622 TMEM110-MUSTN1A8MSY1 372 aa6.38□□□□□ -1.39
CPSF2-205ENST00000556622 C9IYK1 514 aa6.38□□□□□ -1.39
CPSF2-205ENST00000556622 DNM1LO00429 736 aa6.38□□□□□ -1.39
CPSF2-205ENST00000556622 NKRFO15226 690 aaKnown RBP eCLIP6.38□□□□□ -1.39
CPSF2-205ENST00000556622 KIF1CO43896 1103 aaKnown RBP6.38□□□□□ -1.39
CPSF2-205ENST00000556622 CAND2O75155 1236 aa6.38□□□□□ -1.39
CPSF2-205ENST00000556622 DUSP11O75319 330 aaKnown RBP6.38□□□□□ -1.39
CPSF2-205ENST00000556622 RASSF9O75901 435 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms