RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 KIAA0319LQ8IZA0 1049 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 SLC4A11Q8NBS3 891 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 IPMKQ8NFU5 416 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 GTF3C2Q8WUA4 911 aaPredicted RBP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 SGK3Q96BR1 496 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 FAM118BQ9BPY3 351 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 CCDC77Q9BR77 488 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 TUT1Q9H6E5 874 aaKnown RBP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 NEK6Q9HC98 313 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 MRPL39Q9NYK5 338 aaKnown RBP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 PARP2Q9UGN5 583 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 SLC8A2Q9UPR5 921 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 COL1A2P08123 1366 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 CAPN14A8MX76 684 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 SMNDC1O75940 238 aaKnown RBP eCLIP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 HSMCR30P0CW71 290 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 MCF2P10911 925 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 PHKA2P46019 1235 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 RENBPP51606 427 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 KPNA1P52294 538 aaPredicted RBP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 USP46P62068 366 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 CCNA1P78396 465 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 NIPAL4Q0D2K0 466 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 HIC1Q14526 733 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 NR1D2Q14995 579 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 WDR72Q3MJ13 1102 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 DUSP28Q4G0W2 176 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 PNMA8AQ86V59 439 aaPredicted RBP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 NAT8LQ8N9F0 302 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 PPP1R13LQ8WUF5 828 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 TIFAQ96CG3 184 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 ANKRD36BP1Q96IX9 119 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 CPXM1Q96SM3 734 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 HEMGNQ9BXL5 484 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 OSBPL1AQ9BXW6 950 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 RPF1Q9H9Y2 349 aaKnown RBP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 NXF1Q9UBU9 619 aaKnown RBP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 BAIAP2L1Q9UHR4 511 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 PTBP2Q9UKA9 531 aaKnown RBP5.25□□□□□ -1.57
TMEM260-210ENST00000556422 GJD2Q9UKL4 321 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 CFL2Q9Y281 166 aa5.25□□□□□ -1.57
TMEM260-210ENST00000556422 GOLGA8SH3BPF8 625 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 RIPK2O43353 540 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 CILPO75339 1184 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 IL18RAPO95256 599 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 BAG2O95816 211 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 FGFR4P22455 802 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 HOXA11P31270 313 aaPredicted RBP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 PRKAR1BP31321 381 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 GTF2A2P52657 109 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 LIMK1P53667 647 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 GNGT1P63211 74 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 VAC14Q08AM6 782 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 TRPC3Q13507 836 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 PTK6Q13882 451 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 SLC29A2Q14542 456 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 LIN9Q5TKA1 542 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 PRUNE1Q86TP1 453 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 TEX9Q8N6V9 391 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 NIPA2Q8N8Q9 360 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 GLIS1Q8NBF1 620 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 EXD1Q8NHP7 514 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 TLCD1Q96CP7 247 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 OSBPL8Q9BZF1 889 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 ZNF518BQ9C0D4 1074 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 ELOVL4Q9GZR5 314 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 VCXQ9H320 206 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 CYP4F11Q9HBI6 524 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 ZIM2Q9NZV7 527 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 ZMYND8Q9ULU4 1186 aaPredicted RBP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 AKT3Q9Y243 479 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 NME7Q9Y5B8 376 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 LAMA2P24043 3122 aaKnown RBP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 PASKQ96RG2 1323 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 MKI67P46013 3256 aaKnown RBP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 C3orf70A6NLC5 250 aaPredicted RBP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 SNPHO15079 494 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 MAGEB2O15479 319 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 TOMM70O94826 608 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 PENKP01210 267 aaPredicted RBP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 TNNC2P02585 160 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 CYP17A1P05093 508 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 ATP5BP06576 529 aaKnown RBP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 CAPN1P07384 714 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 KRT19P08727 400 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 IFNA8P32881 189 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 PCYT1AP49585 367 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 SLC25A11Q02978 314 aaKnown RBP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 GRIK4Q16099 956 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 GEN1Q17RS7 908 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 FAM110CQ1W6H9 321 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 TNFAIP8L3Q5GJ75 292 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 FAM209AQ5JX71 171 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 CYB5D1Q6P9G0 228 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 APLFQ8IW19 511 aaPredicted RBP5.24□□□□□ -1.57
TMEM260-210ENST00000556422 TNS4Q8IZW8 715 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 TMEM35BQ8NCS4 154 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 PJA1Q8NG27 643 aa5.24□□□□□ -1.57
TMEM260-210ENST00000556422 JOSD2Q8TAC2 188 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms