RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 PDCD6IPQ8WUM4 868 aaKnown RBP15.26■□□□□ 0.03
NEK9-209ENST00000556170 MIEF2Q96C03 454 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 PGLYRP2Q96PD5 576 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 KATNAL1Q9BW62 490 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 SNX10Q9Y5X0 201 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 SBF2Q86WG5 1849 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 CXorf49A8MYA2 514 aaPredicted RBP15.26■□□□□ 0.03
NEK9-209ENST00000556170 TOP3BO95985 862 aaKnown RBP15.26■□□□□ 0.03
NEK9-209ENST00000556170 YBX3P16989 372 aaKnown RBP eCLIP15.26■□□□□ 0.03
NEK9-209ENST00000556170 HDAC4P56524 1084 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 BNIP1Q12981 228 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 RGS9BPQ6ZS82 235 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 CMC1Q7Z7K0 106 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 ALYREFQ86V81 257 aaKnown RBP15.26■□□□□ 0.03
NEK9-209ENST00000556170 NIPA2Q8N8Q9 360 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 PTPRN2Q92932 1015 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 TSC22D3Q99576 134 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 EBNA1BP2Q99848 306 aaKnown RBP15.26■□□□□ 0.03
NEK9-209ENST00000556170 TKTL2Q9H0I9 626 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 RRAGCQ9HB90 399 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 IPPQ9Y573 584 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 MEI4A8MW99 385 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 MAP3K7O43318 606 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 PTPN4P29074 926 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 ADGRD1Q6QNK2 874 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 BRI3BPQ8WY22 251 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 MTBPQ96DY7 904 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 KCTD15Q96SI1 283 aaPredicted RBP15.26■□□□□ 0.03
NEK9-209ENST00000556170 ZNF670Q9BS34 389 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 SUDS3Q9H7L9 328 aaPredicted RBP15.26■□□□□ 0.03
NEK9-209ENST00000556170 SLC38A7Q9NVC3 462 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 VANGL2Q9ULK5 521 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 A0A0A0MRY4 1105 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 AIM2O14862 343 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 MFSD11O43934 449 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 OPHN1O60890 802 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 LYPLA1O75608 230 aaPredicted RBP15.26■□□□□ 0.03
NEK9-209ENST00000556170 OLIG2Q13516 323 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 RNF43Q68DV7 783 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 TFAP2DQ7Z6R9 452 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 SLC44A1Q8WWI5 657 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 WNT8BQ93098 351 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 SPATA13Q96N96 652 aa15.26■□□□□ 0.03
NEK9-209ENST00000556170 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.26■□□□□ 0.03
NEK9-209ENST00000556170 E9PBE3 544 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 KLHL41O60662 606 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 MATKP42679 507 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 RPS6KA2Q15349 733 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 CCL14Q16627 93 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 LRRC23Q53EV4 343 aaPredicted RBP15.25■□□□□ 0.03
NEK9-209ENST00000556170 TTC7BQ86TV6 843 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 EGFL6Q8IUX8 553 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 OXNAD1Q96HP4 312 aaPredicted RBP15.25■□□□□ 0.03
NEK9-209ENST00000556170 CXCL16Q9H2A7 254 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 CNTN6Q9UQ52 1028 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 TPP1O14773 563 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 SKIP12755 728 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 TEX9Q8N6V9 391 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 POPDC2Q9HBU9 364 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 ZBTB42B2RXF5 422 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 NOS2P35228 1153 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 LILRA4P59901 499 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 PITX1P78337 314 aaPredicted RBP15.25■□□□□ 0.03
NEK9-209ENST00000556170 RABGAP1LQ5R372 815 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 ZDHHC17Q8IUH5 632 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 TTC8Q8TAM2 541 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 HDAC11Q96DB2 347 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 OR12D3Q9UGF7 316 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 CDY2AQ9Y6F7 541 aa15.25■□□□□ 0.03
NEK9-209ENST00000556170 IGKV6-21A0A0C4DH24 114 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 SNAI1O95863 264 aaPredicted RBP15.24■□□□□ 0.03
NEK9-209ENST00000556170 CPB1P15086 417 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 BRCC3P46736 316 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 MGAT5Q09328 741 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 PPM1JQ5JR12 505 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 SYPL2Q5VXT5 272 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 LRRC52Q8N7C0 313 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 GABPB2Q8TAK5 448 aaPredicted RBP15.24■□□□□ 0.03
NEK9-209ENST00000556170 HSFY1Q96LI6 401 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 VCXQ9H320 206 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 PTPRHQ9HD43 1115 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 PACSIN3Q9UKS6 424 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 PRPF4O43172 522 aaKnown RBP eCLIP15.24■□□□□ 0.03
NEK9-209ENST00000556170 PHGDHO43175 533 aaKnown RBP15.24■□□□□ 0.03
NEK9-209ENST00000556170 CNMDO75829 334 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 LTFP02788 710 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 RALBP11234 206 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 TCN1P20061 433 aaPredicted RBP15.24■□□□□ 0.03
NEK9-209ENST00000556170 NR2C2P49116 596 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 ART3Q13508 389 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 CRYMQ14894 314 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 SDHAF4Q5VUM1 108 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 MFSD14CQ5VZR4 134 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 SHCBP1Q8NEM2 672 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 APBA2Q99767 749 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 LRRC40Q9H9A6 602 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 CHST12Q9NRB3 414 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 DTLQ9NZJ0 730 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 ST3GAL5Q9UNP4 418 aa15.24■□□□□ 0.03
NEK9-209ENST00000556170 MT-CO1P00395 513 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms