RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 C2orf15Q8WU43 125 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 CASP10Q92851 521 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 TIFAQ96CG3 184 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 SPATA17Q96L03 361 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 TKTL2Q9H0I9 626 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 OSBPL2Q9H1P3 480 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 SMOC2Q9H3U7 446 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 WDCPQ9H6R7 721 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 NINJ2Q9NZG7 142 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 VPS18Q9P253 973 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 MTRRQ9UBK8 725 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 HEY1Q9Y5J3 304 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 MICAL3Q7RTP6 2002 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 NDC80O14777 642 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 VAV1P15498 845 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 CSF2RAP15509 400 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 RAG1P15918 1043 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 MAGEA6P43360 314 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 ZNF135P52742 658 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 EIF3BP55884 814 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 WDR5P61964 334 aaKnown RBP9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 GAD2Q05329 585 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 FPGSQ05932 587 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 GABPB1Q06547 395 aaPredicted RBP9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 SLC45A4Q5BKX6 768 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 TNFAIP8L3Q5GJ75 292 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 BTBD8Q5XKL5 378 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 KCNT2Q6UVM3 1135 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 HOOK3Q86VS8 718 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 PPIL6Q8IXY8 311 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 SLC39A11Q8N1S5 342 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 FBXO22Q8NEZ5 403 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 LRRN4Q8WUT4 740 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 SLC39A13Q96H72 371 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 QKIQ96PU8 341 aaKnown RBP eCLIP9.8□□□□□ -0.841e-7■■□□□ 11.5
HNRNPC-223ENST00000556142 C1QTNF1Q9BXJ1 281 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 PHACTR1Q9C0D0 580 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 FBXO44Q9H4M3 255 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 FAM204AQ9H8W3 233 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 ADAM21Q9UKJ8 722 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 SHOC2Q9UQ13 582 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 NEU3Q9UQ49 428 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 SLC27A5Q9Y2P5 690 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 SNX10Q9Y5X0 201 aa9.8□□□□□ -0.84
HNRNPC-223ENST00000556142 WDR27A2RRH5 827 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 C5orf60A6NFR6 353 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 KCNU1A8MYU2 1149 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 HACD1B0YJ81 288 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 E7ESA3 106 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 SMAPO00193 183 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 EEF2KO00418 725 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 ALOX15BO15296 676 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 KCNN4O15554 427 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 CREB3O43889 395 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 MFSD11O43934 449 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 GCATO75600 419 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 SOAT2O75908 522 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 TMEM63AO94886 807 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 MAP3K6O95382 1288 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 TTC4O95801 387 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 ZDHHC11BP0C7U3 371 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 ERCC2P18074 760 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 ALDH7A1P49419 539 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 ARPP19P56211 112 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 KCNJ11Q14654 390 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 PRKD1Q15139 912 aaPredicted RBP9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 TERF2Q15554 542 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 USP41Q3LFD5 358 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 ARL13BQ3SXY8 428 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 BRMS1LQ5PSV4 323 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 FAM182AQ5T1J6 154 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 AGBL2Q5U5Z8 902 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 RASIP1Q5U651 963 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 MANEALQ5VSG8 457 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 C16orf59Q7L2K0 433 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 TMCO2Q7Z6W1 182 aaPredicted RBP9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 CDKL3Q8IVW4 592 aaPredicted RBP9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 TP53INP2Q8IXH6 220 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 CMTR2Q8IYT2 770 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 HAPLN3Q96S86 360 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 RUFY1Q96T51 708 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 CLSTN3Q9BQT9 956 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 KLC2Q9H0B6 622 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 DNAJC17Q9NVM6 304 aaKnown RBP9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 GMIPQ9P107 970 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 PAK5Q9P286 719 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 SFMBT1Q9UHJ3 866 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 CDY1Q9Y6F8 540 aa9.79□□□□□ -0.84
HNRNPC-223ENST00000556142 PLXNA3P51805 1871 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 EFCAB14O75071 495 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 ABLIM3O94929 683 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 RTN3O95197 1032 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 SOD2P04179 222 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 LINC00271P0C7V0 271 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 CPB1P15086 417 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 ATF6P18850 670 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 YWHAQP27348 245 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 HOXC13P31276 330 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 MAGEA4P43358 317 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms