RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 FCGR1AP12314 374 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 AZU1P20160 251 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 GALNSP34059 522 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 GLUD2P49448 558 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 RPS16P62249 146 aaKnown RBP3.59□□□□□ -1.83
SRP54-207ENST00000555535 SLC29A2Q14542 456 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 CNN3Q15417 329 aaKnown RBP3.59□□□□□ -1.83
SRP54-207ENST00000555535 PARM1Q6UWI2 310 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 CLEC9AQ6UXN8 241 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 CREB3L2Q70SY1 520 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 RFLNBQ8N5W9 214 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 C7orf57Q8NEG2 295 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 ELOVL1Q9BW60 279 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 C1QTNF4Q9BXJ3 329 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 RNF26Q9BY78 433 aaPredicted RBP3.59□□□□□ -1.83
SRP54-207ENST00000555535 ZCWPW1Q9H0M4 648 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 CHST8Q9H2A9 424 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 VPS45Q9NRW7 570 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 COL20A1Q9P218 1284 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 STEAP1Q9UHE8 339 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 VPS51Q9UID3 782 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 MID2Q9UJV3 735 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 HDAC9Q9UKV0 1011 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 L1RE1Q9UN81 338 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 HEMK1Q9Y5R4 338 aaPredicted RBP3.59□□□□□ -1.83
SRP54-207ENST00000555535 CKAP5Q14008 2032 aa3.59□□□□□ -1.83
SRP54-207ENST00000555535 LOC102724159A0A0B4J2E5 919 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 PLSCR5A0PG75 271 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 TXNP10599 105 aaKnown RBP3.58□□□□□ -1.84
SRP54-207ENST00000555535 BRAFP15056 766 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 ZKSCAN1P17029 563 aaPredicted RBP3.58□□□□□ -1.84
SRP54-207ENST00000555535 BTF3P20290 206 aaKnown RBP3.58□□□□□ -1.84
SRP54-207ENST00000555535 ACVR2AP27037 513 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 HTR7P34969 479 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 KRT2P35908 639 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 CPT1AP50416 773 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 COPAP53621 1224 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 FMO1Q01740 532 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 PWP2Q15269 919 aaKnown RBP3.58□□□□□ -1.84
SRP54-207ENST00000555535 CNGA2Q16280 664 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 PLAG1Q6DJT9 500 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 ARMC9Q7Z3E5 817 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 RUNDC1Q96C34 613 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 RTP4Q96DX8 246 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 ZNF668Q96K58 619 aaPredicted RBP3.58□□□□□ -1.84
SRP54-207ENST00000555535 HIST1H2AAQ96QV6 131 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 SENP7Q9BQF6 1050 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 BRINP2Q9C0B6 783 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 CDH19Q9H159 772 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 TMEM60Q9H2L4 133 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 SAP30LQ9HAJ7 183 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 AS3MTQ9HBK9 375 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 AFF4Q9UHB7 1163 aaKnown RBP3.58□□□□□ -1.84
SRP54-207ENST00000555535 DTX4Q9Y2E6 619 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 SNED1Q8TER0 1413 aa3.58□□□□□ -1.84
SRP54-207ENST00000555535 E2F8A0AVK6 867 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 CFAP69A5D8W1 941 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 A6NNC1 897 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 A6NNZ2 444 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 TTC34A8MYJ7 566 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 ISM1B1AKI9 464 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 FAM227AF5H4B4 570 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 SPRY3O43610 288 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 RFPL1O75677 317 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 KLKB1P03952 638 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 CHRNB1P11230 501 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 TPH1P17752 444 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 IDUAP35475 653 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 EIF4A1P60842 406 aaKnown RBP3.57□□□□□ -1.84
SRP54-207ENST00000555535 GAD2Q05329 585 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 EEF1A2Q05639 463 aaKnown RBP3.57□□□□□ -1.84
SRP54-207ENST00000555535 MTAPQ13126 283 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 DNASE1L3Q13609 305 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 CNGA3Q16281 694 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 MANEALQ5VSG8 457 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.57□□□□□ -1.84
SRP54-207ENST00000555535 H1FNTQ75WM6 255 aaPredicted RBP3.57□□□□□ -1.84
SRP54-207ENST00000555535 SESTD1Q86VW0 696 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 INPP5DQ92835 1189 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 NODALQ96S42 347 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 TTLL2Q9BWV7 592 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 EGLN1Q9GZT9 426 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 ISCUQ9H1K1 167 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 ERVK-5Q9HDB9 667 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 IGSF9Q9P2J2 1179 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 TPCN1Q9ULQ1 816 aa3.57□□□□□ -1.84
SRP54-207ENST00000555535 NOP58Q9Y2X3 529 aaKnown RBP3.57□□□□□ -1.84
SRP54-207ENST00000555535 COL15A1P39059 1388 aa3.56□□□□□ -1.84
SRP54-207ENST00000555535 PRPF3O43395 683 aaKnown RBP3.56□□□□□ -1.84
SRP54-207ENST00000555535 FRS3O43559 492 aa3.56□□□□□ -1.84
SRP54-207ENST00000555535 F7P08709 466 aaPredicted RBP3.56□□□□□ -1.84
SRP54-207ENST00000555535 TMIGD3P0DMS9 266 aaPredicted RBP3.56□□□□□ -1.84
SRP54-207ENST00000555535 RASSF2P50749 326 aa3.56□□□□□ -1.84
SRP54-207ENST00000555535 RAE1P78406 368 aaKnown RBP3.56□□□□□ -1.84
SRP54-207ENST00000555535 UNC13DQ70J99 1090 aa3.56□□□□□ -1.84
SRP54-207ENST00000555535 CLMNQ96JQ2 1002 aa3.56□□□□□ -1.84
SRP54-207ENST00000555535 SELENOOQ9BVL4 669 aa3.56□□□□□ -1.84
SRP54-207ENST00000555535 FAM83DQ9H4H8 585 aa3.56□□□□□ -1.84
SRP54-207ENST00000555535 DDX31Q9H8H2 851 aaKnown RBP3.56□□□□□ -1.84
SRP54-207ENST00000555535 PLAC1Q9HBJ0 212 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms