RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 BEND2Q8NDZ0 799 aa4.45□□□□□ -1.7
LSM6P2-201ENST00000552208 CUL5Q93034 780 aa4.45□□□□□ -1.7
LSM6P2-201ENST00000552208 SH3KBP1Q96B97 665 aa4.45□□□□□ -1.7
LSM6P2-201ENST00000552208 RNFT2Q96EX2 444 aa4.45□□□□□ -1.7
LSM6P2-201ENST00000552208 SSBP3Q9BWW4 388 aaPredicted RBP4.45□□□□□ -1.7
LSM6P2-201ENST00000552208 TPSD1Q9BZJ3 242 aa4.45□□□□□ -1.7
LSM6P2-201ENST00000552208 SLC25A18Q9H1K4 315 aa4.45□□□□□ -1.7
LSM6P2-201ENST00000552208 SAP30LQ9HAJ7 183 aa4.45□□□□□ -1.7
LSM6P2-201ENST00000552208 GLOD4Q9HC38 313 aa4.45□□□□□ -1.7
LSM6P2-201ENST00000552208 GALNT9Q9HCQ5 603 aa4.45□□□□□ -1.7
LSM6P2-201ENST00000552208 SEPT11Q9NVA2 429 aaKnown RBP4.45□□□□□ -1.7
LSM6P2-201ENST00000552208 TRPM5Q9NZQ8 1165 aa4.45□□□□□ -1.7
LSM6P2-201ENST00000552208 HCN3Q9P1Z3 774 aa4.45□□□□□ -1.7
LSM6P2-201ENST00000552208 GIMAP2Q9UG22 337 aa4.45□□□□□ -1.7
LSM6P2-201ENST00000552208 TBC1D3DA0A087WVF3 549 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 TBC1D3IA0A087WXS9 549 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 TBC1D3EA0A087X179 549 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 TBC1D3KA0A087X1G2 549 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 SYNDIG1LA6NDD5 238 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 TBC1D3BA6NDS4 549 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 TBC1D3FA6NER0 549 aaPredicted RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 PATE3B3GLJ2 98 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 TBC1D3LB9A6J9 549 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 GTPBP1O00178 669 aaKnown RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 GRM8O00222 908 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 TSPAN4O14817 238 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 SLC16A3O15427 465 aaKnown RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 PMPCBO75439 489 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 MBPP02686 304 aaPredicted RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 DNTTP04053 509 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 WEE2P0C1S8 567 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 TBC1D3HP0C7X1 549 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 ARSAP15289 507 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 ITPKBP27987 946 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 AVPR2P30518 371 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 GRK5P34947 590 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 LIPAP38571 399 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 PCP4P48539 62 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 TAS2R50P59544 299 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 RPS3AP61247 264 aaKnown RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 CREB5Q02930 508 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 HHEXQ03014 270 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 RNASELQ05823 741 aaKnown RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 TDGQ13569 410 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 BECN1Q14457 450 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 PKN1Q16512 942 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 BEAN1Q3B7T3 259 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 SPECC1Q5M775 1068 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 CFAP58Q5T655 872 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 UBAP2Q5T6F2 1119 aaKnown RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 TBC1D3GQ6DHY5 549 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 TBC1D3CQ6IPX1 549 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 TBC1D3Q8IZP1 549 aaPredicted RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 ZNF366Q8N895 744 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 RFWD2Q8NHY2 731 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 RUFY2Q8WXA3 655 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 LPIN2Q92539 896 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 PERPQ96FX8 193 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 ADAM2Q99965 735 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 LBHD1Q9BQE6 289 aaPredicted RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 ALOXE3Q9BYJ1 711 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 TTYH1Q9H313 450 aaPredicted RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 ZNF768Q9H5H4 540 aaKnown RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 CDCP1Q9H5V8 836 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 PDE11AQ9HCR9 933 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 EIF2B3Q9NR50 452 aaKnown RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 DIAPH3Q9NSV4 1193 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 MTMR4Q9NYA4 1195 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 NFKBIL1Q9UBC1 381 aaPredicted RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 ADD3Q9UEY8 706 aaKnown RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 NOL7Q9UMY1 257 aaKnown RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 MAP3K2Q9Y2U5 619 aa4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 COPG1Q9Y678 874 aaKnown RBP4.44□□□□□ -1.7
LSM6P2-201ENST00000552208 hCG_1807616A0A1W2PRN6 198 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 WDR27A2RRH5 827 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 B4DLN1 442 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 TEX22C9J3V5 150 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 PROM1O43490 865 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 CA12O43570 354 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 GJB3O75712 270 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 TUBB4AP04350 444 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 URODP06132 367 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 IL6RP08887 468 aaPredicted RBP4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 GLULP15104 373 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 IL11P20809 199 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 PRKCHP24723 683 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 ADRA1DP25100 572 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 ZFP36P26651 326 aaKnown RBP4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 ICAM3P32942 547 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 ACSL1P33121 698 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 HADHAP40939 763 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 HARS2P49590 506 aaKnown RBP4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 CDH15P55291 814 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 IFI35P80217 286 aaPredicted RBP4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 CDK18Q07002 472 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 DCTN2Q13561 401 aaKnown RBP4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 DUSP28Q4G0W2 176 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 TREML2Q5T2D2 321 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 ARMC6Q6NXE6 501 aa4.43□□□□□ -1.7
LSM6P2-201ENST00000552208 TTC39CQ8N584 583 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms