RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 A0A087WV48 116 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 FAM149AA5PLN7 773 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 TSPAN3O60637 253 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 MYL1P05976 194 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 ATP5BP06576 529 aaKnown RBP14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 C7P10643 843 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 HLA-FP30511 346 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 TKTL1P51854 596 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 C21orf59P57076 290 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 RPS14P62263 151 aaKnown RBP14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 PPP3CAQ08209 521 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 CAMK2BQ13554 666 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 TRIP4Q15650 581 aaPredicted RBP14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 PTPRNQ16849 979 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 FOXD4L6Q3SYB3 417 aaPredicted RBP14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 FOXD4L5Q5VV16 416 aaPredicted RBP14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 FOXD4L3Q6VB84 417 aaPredicted RBP14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 CHST9Q7L1S5 443 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 MARCH9Q86YJ5 346 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 FMNL3Q8IVF7 1028 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 FAM186BQ8IYM0 893 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 ZNF366Q8N895 744 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 ANKRD52Q8NB46 1076 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 RNF139Q8WU17 664 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 CYB5D2Q8WUJ1 264 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 FOXD4L4Q8WXT5 416 aaPredicted RBP14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 BIRC7Q96CA5 298 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 TMA16Q96EY4 203 aaKnown RBP14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 TMEM176AQ96HP8 235 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 FAXDC2Q96IV6 333 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 BBC3Q96PG8 261 aaPredicted RBP14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 TMEM8AQ9HCN3 771 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 GGA2Q9UJY4 613 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 NCKAP1Q9Y2A7 1128 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 HBS1LQ9Y450 684 aaKnown RBP14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 KALRNO60229 2985 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 BPTFQ12830 3046 aa14.81□□□□□ -0.04
CHMP1A-210ENST00000551981 H0Y8X5 98 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 ACTN4O43707 911 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 LATS1O95835 1130 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 DLDP09622 509 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 RPL13P26373 211 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 GTF2H1P32780 548 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 PSMC2P35998 433 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 CTSKP43235 329 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 SFSWAPQ12872 951 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 NFIL3Q16649 462 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 ADGRF1Q5T601 910 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 ZNF776Q68DI1 518 aaPredicted RBP14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 ARHGAP17Q68EM7 881 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 KRT39Q6A163 491 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 ATL3Q6DD88 541 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 PM20D1Q6GTS8 502 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 TMPRSS12Q86WS5 348 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 CCDC47Q96A33 483 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 SKA1Q96BD8 255 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 ACE2Q9BYF1 805 aaPredicted RBP14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 PRSS16Q9NQE7 514 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 CISHQ9NSE2 258 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 ABCB8Q9NUT2 735 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 SUN2Q9UH99 717 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 USP25Q9UHP3 1055 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 STOML2Q9UJZ1 356 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 CFAP45Q9UL16 551 aa14.8□□□□□ -0.04
CHMP1A-210ENST00000551981 KCNK3O14649 394 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 PAPSS1O43252 624 aaPredicted RBP14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 FLNBO75369 2602 aaKnown RBP14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 CDK4P11802 303 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 PABPC1P11940 636 aaKnown RBP14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 POLR2EP19388 210 aaKnown RBP14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 COL5A1P20908 1838 aaPredicted RBP14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 HNF1BP35680 557 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 ABCG1P45844 678 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 RACK1P63244 317 aaKnown RBP14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 IL9RQ01113 521 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 MBLAC2Q68D91 279 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 DHRS13Q6UX07 377 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 LAYNQ6UX15 382 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 ADIPOR2Q86V24 386 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 ZNF557Q8N988 423 aaPredicted RBP14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 SLC4A11Q8NBS3 891 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 GANCQ8TET4 914 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 NXPE2Q96DL1 559 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 IPO9Q96P70 1041 aaKnown RBP14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 DCBLD2Q96PD2 775 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 UBL7Q96S82 380 aaPredicted RBP14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 ULBP1Q9BZM6 244 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 LRRC4Q9HBW1 653 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 SCML1Q9UN30 329 aa14.79□□□□□ -0.04
CHMP1A-210ENST00000551981 KNTC1P50748 2209 aa14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 PLXNA2O75051 1894 aa14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 XPO1O14980 1071 aaKnown RBP14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 VILLO15195 856 aa14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 STX10O60499 249 aa14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 RNASEH1O60930 286 aaKnown RBP14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 ZSCAN22P10073 491 aaPredicted RBP14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 RAD23BP54727 409 aa14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 ST8SIA6P61647 398 aa14.78□□□□□ -0.04
CHMP1A-210ENST00000551981 GOLGA7BQ2TAP0 167 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms